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SCNpilot_cont_300_bf_scaffold_7865_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_7865_curated_1
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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624..1418
DNA (795bp) protein (265aa)
ABC-3 protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LSG2_9PROT
ABC-3 protein {ECO:0000313|EMBL:EKF07842.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
ABC-3 protein; K09816 zinc transport system permease protein
SCNpilot_cont_300_bf_scaffold_7865_curated_2
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1415..1912
DNA (498bp) protein (166aa)
Zinc uptake transcriptional regulator, Fur family protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J442_9PROT
Fur family transcriptional regulator {ECO:0000313|EMBL:EZQ18045.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
transcriptional regulator np20
SCNpilot_cont_300_bf_scaffold_7865_curated_3
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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1923..2828
DNA (906bp) protein (302aa)
Adenylate cyclase {ECO:0000313|EMBL:CDO58582.1}; EC=4.6.1.1 {ECO:0000313|EMBL:CDO58582.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
putative Chase2 sensor protein; K01768 adenylate cyclase [EC:4.6.1.1]
Putative Chase2 sensor protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW36_PARL1
SCNpilot_cont_300_bf_scaffold_7865_curated_4
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2839..3612)
DNA (774bp) protein (258aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
ddpX; putative D-alanyl-d-alanine dipeptidase; K08641 D-alanyl-D-alanine dipeptidase [EC:3.4.13.22]
Putative D-alanyl-d-alanine dipeptidase n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LLX3_DINSH
SCNpilot_cont_300_bf_scaffold_7865_curated_5
unknown

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comp(3639..3896)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_7865_curated_6
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4016..4720
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTE6_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS63179.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_300_bf_scaffold_7865_curated_7
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5545..6807)
DNA (1263bp) protein (421aa)
Permease of the major facilitator superfamily n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W817_MAGSA
major facilitator superfamily permease
Tax=GWC2_Geobacteraceae_53_11_curated
SCNpilot_cont_300_bf_scaffold_7865_curated_8
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6861..7592)
DNA (732bp) protein (244aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Isoprenyl transferase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BHV6_9RHIZ
undecaprenyl diphosphate synthase
Displaying 8 items

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