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SCNpilot_cont_300_bf_scaffold_3238_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: 178..2220

Top 3 Functional Annotations

Value Algorithm Source
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ABS61631.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABS61631.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 674.0
  • Bit_score: 598
  • Evalue 1.30e-167
Penicillin-binding protein, 1A family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HNZ8_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 674.0
  • Bit_score: 598
  • Evalue 9.40e-168
1A family penicillin-binding protein similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 674.0
  • Bit_score: 598
  • Evalue 2.90e-168

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2043
ATGGCGCCGCGCAAAACATCGGAACCACCTTCCGAACGGCCGGGCGTGCGTATCGTGCGCGTGCCATTGTCCGCATCGTCGCAGGACCGCCCGCCGCAAGCGCCGAAACGCAAGCGAAGCTGGCCCTATGTGCTGGCGTTGCTGGCGGTGTGGGGCATGATTTTCGGGGCCGTGCTGTTTTCCAACTGGATCGCGGAGCTGCCGGATATTTCCGGCCTGATGGCGCGCGCGCCATCGCACGATGTCACCCTGCTCGATGCGGAGGGCCGTTTCATTGCGCGGCGTGGGCTGACCCATGGCGCGCTGATCGATGCGAAAACCCTGCCGCCTTATGTCAGCAATGCGTTCATCGCCATCGAAGACCGACGCTTCCGCAGCCATTTCGGTGTCGATCCGAAAGGCTTGTTGCGCGCTGCCGTCGCCAATCTGACGGCGGGCGCAGTGGTGGAAGGCGGCTCCACCATCACTCAGCAACTGGCAAAGAACCTGTTCCTGAAACCCAAGCGCACCTTTTCACGCAAGGCGCAGGAGGCGCTGCTCGCCGTCTATCTTGAGGCGCGCTACAGCAAGGACCAGATTCTGACGCTTTATCTGAACCGGATTTATTTCGGCGCCGGGGTTTATGGCATCGAAGCGGCAGCAGAGCGTTTCTTCAACAAGCCGGCAGCGGATCTGACGCTGGTTGAGGCCGCAATGCTGGCCGGCAGCGTGAAGGCGCCGGCGCGTTACAACCCGCTTGCCAATACCGACGCATCGGTTGCGCGTGCCGCCACCGTGCTTCACGCGATGGCCGAAGAAGGCCTGATCACACCTGCGCAGGAAAGAACGGCGCGCGCCACGCGGCCCCGCGTGATCAAGAGCGCGGGCACGCCCAATTCCGGTTATTTCGCCGATTGGGTGATCGGCAATCTTTCCGGCCTGATCGGCGATTCAACCACGCCGGTGATCGTGCGCACCACGCTTGATCTTTCGCTTCAGGCCAAGGCCGAACGCGCAGTGGAAGCCACGCTTTCCACACAGGGCCCGCCGCGCCACGCGGGCGAGGCCGCCCTTGTCGCGATGACACCGCAAGGGGCGGTTCGCGCCATGGTCGGCGGCCGTGCCTATCGCGATACACCGTTCAATCGCGCCAGCGATGCCTTGCGGCAGCCCGGTTCTGCGTTCAAGCCTTTTGTCTATCTGACCGCACTGGAACACGGTTACACCGCGGATGAGGTCATGGACGACAAACCGGTGCAGATCGGCAAGTGGCAGCCCAGCAATTACGAAGGCCGCTATGAAGGCCCGATCACACTGACCCGCGCCTTTGCCAAATCCTCCAATTCCGTTGCCGTGCAACTGACCAACGCGGTCGGCGCACGCGCCGTCGCTGCAACCGCGCACCGCCTTGGCATTTCCGCGCGCCTCGACGCGGTGCCGGCACTCGCGTTGGGGGTTTCGGCCGTCAGCCCGCTGGAGATGACCGGTGCCTATGCCGCGATCGCCAATGGCGGCAATGCGGTTGCGCCTTATGGTGTCAGCGAAATCCGCACTCGCAGCGGAAAACTGTTGTACCGGAGGAGCGGCACGGGGCTTGGCCGGGTGATGTCCCCCACCGACGCCGCGCGCATGACCGGATTGATGTCTGCCGTGGTGCATGAGGGCACCGGACGCGCGGCACAACTCGGCCCCTGGGCAAGCGCGGGCAAGACCGGCACCACGCAGGATTTTCACGATGCCTGGTTCATCGGCTTCACCGCCGATTATGTCTGCGGTGTGTGGATGGGCAACGACAACAATGCGCCGATGAAACGGGTGACGGGCGGCGGATTGCCGGCGCATGTTTTTCACGACTTCATGCTGGCCGCGGAAGAGGGCCTGCCGCCGCGCCCGCTCAACATGCCCACCGCATTGGCGGACAATCAGAATTTGCTGCAAACCGCGCCGCCGCAGGATCAAGCCGGGGCCGTCACGCCACAACCGCAAACGCCAGAGAACGGAAACCAGACTGGAAAGGCGGACAGTTTCGAATCGATCCTCGACCGCCTGTTCGGCGGCACCTGA
PROTEIN sequence
Length: 681
MAPRKTSEPPSERPGVRIVRVPLSASSQDRPPQAPKRKRSWPYVLALLAVWGMIFGAVLFSNWIAELPDISGLMARAPSHDVTLLDAEGRFIARRGLTHGALIDAKTLPPYVSNAFIAIEDRRFRSHFGVDPKGLLRAAVANLTAGAVVEGGSTITQQLAKNLFLKPKRTFSRKAQEALLAVYLEARYSKDQILTLYLNRIYFGAGVYGIEAAAERFFNKPAADLTLVEAAMLAGSVKAPARYNPLANTDASVARAATVLHAMAEEGLITPAQERTARATRPRVIKSAGTPNSGYFADWVIGNLSGLIGDSTTPVIVRTTLDLSLQAKAERAVEATLSTQGPPRHAGEAALVAMTPQGAVRAMVGGRAYRDTPFNRASDALRQPGSAFKPFVYLTALEHGYTADEVMDDKPVQIGKWQPSNYEGRYEGPITLTRAFAKSSNSVAVQLTNAVGARAVAATAHRLGISARLDAVPALALGVSAVSPLEMTGAYAAIANGGNAVAPYGVSEIRTRSGKLLYRRSGTGLGRVMSPTDAARMTGLMSAVVHEGTGRAAQLGPWASAGKTGTTQDFHDAWFIGFTADYVCGVWMGNDNNAPMKRVTGGGLPAHVFHDFMLAAEEGLPPRPLNMPTALADNQNLLQTAPPQDQAGAVTPQPQTPENGNQTGKADSFESILDRLFGGT*