ggKbase home page

SCNpilot_cont_300_bf_scaffold_3116_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: 5181..6044

Top 3 Functional Annotations

Value Algorithm Source
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 286.0
  • Bit_score: 289
  • Evalue 5.50e-75
histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 285.0
  • Bit_score: 282
  • Evalue 2.00e-73
Histidine--tRNA ligase n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TGP0_PARBH similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 285.0
  • Bit_score: 282
  • Evalue 6.30e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
TTGGCGAAACTTCTGGGTCAGGGCCGCAAGGATGAAAGTGGCGATTTCACCAAGGGTGCAAACCTGCCTGCCACCGCCATCGATGCGGTGTTGAAATTCTTTGCGGCCAACGATCCCGAATCGGGCAGGGGCGGTCCGCGTTCCAACACACAAATTCTGGCAGAGCTTCAGTCTTTCGTCGGCACCAGCACCATTGGTGCGGCAGGGATCGCGGATCTCGTGGCGCTGAACGAATTGATTGCGGCGAATGGCTATGCCGATGGTCGCATCGCGATCGATCCTTCCATCGTTCGTGGTCTTGATTATTACACCGGCGCGGTGTTCGAAGCACAGCTGACGTTTCCCGTTGCCAATGAGGCGGGCGAAACCGTGGTGTTCGGTTCTGTCGCGGGCGGCGGGCGTTATGACGACCTGGTGGCCCGCTTCACCGGTCAGGCCATGCCGGCCACCGGCGTTTCCATCGGGGTCAGCCGTCTTCTTACCGCACTGAGGAATCGCACATCCGCGCAGATCGCACCGCTGGTGGTAGTGCTGGCGATGGACAAAGCCGGGTTGGCCGAAAGCTTTGCACTGGTGCGCGAATTGCGTGCTGCCGGAATCCGGGCAGAGGCTTATGTCGGCGATGCCGGTCTGAAGGCGCAATTCAAATATGCCGATAAGCGCGGCGCCGCGATTGCGGTGATGGAAGGTTCTGACGAGCGCGCGCGGGGGGAGATCACGCTGAAGGATTTGGCCCTTGGTGCCGAACTTGCCAAATCGGTGGAGAGCCGTGCGGCCTGGGTGGAAGGCAGGCCCGCGCAGATCGCTGTGCCGCGGGGCGAATTGGTGGCGCGTGTAAATGCCATGCTGGCGCGTGAAGGGTAG
PROTEIN sequence
Length: 288
LAKLLGQGRKDESGDFTKGANLPATAIDAVLKFFAANDPESGRGGPRSNTQILAELQSFVGTSTIGAAGIADLVALNELIAANGYADGRIAIDPSIVRGLDYYTGAVFEAQLTFPVANEAGETVVFGSVAGGGRYDDLVARFTGQAMPATGVSIGVSRLLTALRNRTSAQIAPLVVVLAMDKAGLAESFALVRELRAAGIRAEAYVGDAGLKAQFKYADKRGAAIAVMEGSDERARGEITLKDLALGAELAKSVESRAAWVEGRPAQIAVPRGELVARVNAMLAREG*