ggKbase home page

SCNpilot_cont_300_bf_scaffold_1728_curated_8

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(8158..9780)

Top 3 Functional Annotations

Value Algorithm Source
NusA antitermination factor n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HZ91_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 538.0
  • Bit_score: 755
  • Evalue 2.80e-215
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 542.0
  • Bit_score: 775
  • Evalue 3.70e-221
NusA antitermination factor; K02600 N utilization substance protein A similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 538.0
  • Bit_score: 755
  • Evalue 8.80e-216

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1623
ATGGTTACCGGCGTTGCCGCCAACAGGCTCGAACTGCTGCAGATTGCCGACGCCGTCGCGCGCGACAAGTCGATCGACAAGGACGTGGTGCTGCACGCGATGGAAGAAGCGATGCAGCGCGCGGCCAAGGCCCGCTATGGCAGCGAGAACGACATCCGGGTGGAGATCGATCCGAAAACCGGTGAAACCCATGTTTCGCGCTATCTTGCCGTGGTCGAACTGGTCGAAAACGACAAGATCGAGATCAGTCTGGACGACGCCCATGTGCGCAACCCCGCCGCCCAGGTCGGTGACATCATCGCCGAAACCCTGCCGCCGGTGGATTTCAGCCGCATCGCCGCCCAGGCCGCGAAACAGGTCATCGTGCAGAAGGTGCGCGATGCCGAACGCGAACGTCAGTACAAGGAATATAAGGACCGCATCGGCGAAATCGTCCACGGCATCGTGAAACGTGCCGAATTCGGTTCCGTCGTGGTCGATCTCGGCCGGGCCGAAGGTGTCGTCCGCCGCGATGAGATGATCCCGCGTGAATCGTTCCGCACCGGCGACCGCATCCGCGCCTATATCTACGATGTGCGCCGCGAAACCCGGGGCCCGCAGATTTTCCTGTCGCGCTCCCATCCGCAATTCATGGTGCGGCTGTTCGCGCAGGAAGTGCCGGAAATCTATGACGGCATCATCGAAATCCGCGCTGTGGCGCGCGATCCCGGCTCCCGCGCCAAGATCGCGGTGATCTCGAAGGATTCCTCCATCGATCCGGTCGGCGCCTGCGTCGGCATGCGCGGCGTGCGCGTGCAGGCGGTGGTGCAGGAACTGCAGGGCGAACGCATCGACATCATTCCCTGGTCGCCCGATCCGGCCACCTTCATCGTCAATGCGCTGGCGCCCGCCGAAGTCGCCAAGGTGGTGCTGGATGAAGACACCCACCGGGTTGAAGTGGTGGTGCCGGATGAACAGCTTTCGCTCGCCATCGGCCGGCGCGGGCAGAATGTCCGCCTCGCCTCCCAGCTCACCAGCTGGCAGATCGACATCCTGACCGAGGCGGAAGAATCCGAACGCCGCCAGAAGGAATTCACCGAACGCACCACCCTTTTCATGGACGCGCTGGATGTCGATGAAACGGTGGCGCAGTTGCTCGCCTCCGAAGGCTTTGCCGATATCGAGGATGTGGCCTATGTGCCCCTCGAAGATCTCTCCGACATCGAAGGCTTCGATGAGGAAACCGCGCAGGAGCTGCAAAGCCGCGCGGTCGAATATATCGAAGCCCGCAACAAGGAGCTGGACGATCGCCGCCGCGAACTCGGCGTCGAGGATCCGGTGTTGACGGTCGAAGGCATCACCCCCGCCATGGCGGTTGCGCTGGGCGAGCATGAGGTGAAATCGCTGGAAGACCTCGCGGGCTGCGCCACCGACGATCTGCTCGGCTATTACGAGGTGAACAAGGAGAAGGAGCGCGTGCGCGTCCCCGGCGCACTCGATGGCTTCGATCTGACGGCGGATGCCGCCAACGCCATCATCATGAAGGCGCGTGTGATGGCCGGCTGGGTGGAAGAAGAACCGGAGCCTGCGGAAGGAGACGCCGAAACTGCGGATGAACCGGCGGCGGAGGGTGACGCGGCGTGA
PROTEIN sequence
Length: 541
MVTGVAANRLELLQIADAVARDKSIDKDVVLHAMEEAMQRAAKARYGSENDIRVEIDPKTGETHVSRYLAVVELVENDKIEISLDDAHVRNPAAQVGDIIAETLPPVDFSRIAAQAAKQVIVQKVRDAERERQYKEYKDRIGEIVHGIVKRAEFGSVVVDLGRAEGVVRRDEMIPRESFRTGDRIRAYIYDVRRETRGPQIFLSRSHPQFMVRLFAQEVPEIYDGIIEIRAVARDPGSRAKIAVISKDSSIDPVGACVGMRGVRVQAVVQELQGERIDIIPWSPDPATFIVNALAPAEVAKVVLDEDTHRVEVVVPDEQLSLAIGRRGQNVRLASQLTSWQIDILTEAEESERRQKEFTERTTLFMDALDVDETVAQLLASEGFADIEDVAYVPLEDLSDIEGFDEETAQELQSRAVEYIEARNKELDDRRRELGVEDPVLTVEGITPAMAVALGEHEVKSLEDLAGCATDDLLGYYEVNKEKERVRVPGALDGFDLTADAANAIIMKARVMAGWVEEEPEPAEGDAETADEPAAEGDAA*