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SCNpilot_cont_300_bf_scaffold_1021_curated_17

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(14850..15587)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 245.0
  • Bit_score: 312
  • Evalue 4.00e-82
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 245.0
  • Bit_score: 311
  • Evalue 2.00e-82
tRNA pseudouridine synthase A n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SD75_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 245.0
  • Bit_score: 312
  • Evalue 2.80e-82

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCGCGCTACCGCCTGACGCTCGAATATGATGGCGCGCCCTTTGTCGGCTTCCAGCGTCAGAACAATGGCCCCTCGGTGCAGGGGGCGCTGGAAGACGCGATCGAAAAACTCTCGGCCCAGCGCGTCACCGTGATGGCGGCCGGCCGCACCGATGCCGGTGTCCATGCGCTGGCGCAGGNNNNNNNNNNNNATCTGGAAAAAACCTATGTGGCCGAAAAGGTGCGCGATGCACTGAACTTCCACCTGCGGCCCAATCCGGTGTCGGTGCTGGATGCGGTGGTTGCGGCGCCCGATTTCCACGCCCGTTTTCAGGCCAGGGGCCGGCATTATCTCTACCGCATTCTCTGCCGCACCGCGCCGCCCGCCATCGACCGTGGCCGGGTCTGGCATGTCATGCACGATCTCGATTGGCAGGCGATGCACCGCGCGGCACAGGTGCTTGTCGGCCATCATGATTTCACCACCTTCCGCGCCACCAATTGCCAGGCCAAATCGCCGATGAAGACGCTGGATCGTCTGGCGGTTGAACCGGCGGGCGCGGAAATTCACATCCATGCCGATGCGCGCAGCTTCCTGCATCATCAGGTGCGCTCGATGGTGGGGTCGCTGAAACTGGTGGGGGAGGGCAAGTGGGACGAAGCCCGCCTTGCCGCCGCGCTGGCGGCGCGCGATCGTACCGCCTGCGGTCCGGTGGCACCGGCCGAAGGGCTTTATCTCACCGCTGTTGATTACTGA
PROTEIN sequence
Length: 246
MPRYRLTLEYDGAPFVGFQRQNNGPSVQGALEDAIEKLSAQRVTVMAAGRTDAGVHALAQXXXXXLEKTYVAEKVRDALNFHLRPNPVSVLDAVVAAPDFHARFQARGRHYLYRILCRTAPPAIDRGRVWHVMHDLDWQAMHRAAQVLVGHHDFTTFRATNCQAKSPMKTLDRLAVEPAGAEIHIHADARSFLHHQVRSMVGSLKLVGEGKWDEARLAAALAARDRTACGPVAPAEGLYLTAVDY*