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SCNpilot_cont_300_bf_scaffold_1021_curated_19

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(16515..17033)

Top 3 Functional Annotations

Value Algorithm Source
def; peptide deformylase Def (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 171.0
  • Bit_score: 220
  • Evalue 5.50e-55
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 169.0
  • Bit_score: 220
  • Evalue 1.90e-54
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D54A31 similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 172.0
  • Bit_score: 223
  • Evalue 1.20e-55

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGACCATACGCCCGATCATTACGGCCCCCGATCCGCGGCTGAAAACGGTGTCCGAAGCGGTGGACCGGGTGAACGATTCCATCCGCAAGCTGGCTGACGACATGGTGGACAGCATGTATGCCGCCGATGGCATCGGCCTGGCCGCGATCCAGATCGGCGTGCCCAAACGCATGCTGGTGATGGATCTGGATCAGAAGGATGGCGGCCGCAATCCGCGCCTGTTCATCAATCCCAAGGTCGTCTGGGCCTCGGAAGAGATGGCGAAGATGGAGGAGGGTTGCCTCTCCGTCCCCGAAGTGTGGGAGGACGTGGAACGCCCCGCCCGCATCACCGCCGAATATCTCGATCGCGACGGCGCGCTCCAGACGCTGGAGGCCGATGGCCTGCTCGCCACCTGCCTGCAGCATGAGATCGATCATCTGAACGGCGTGCTGTTCATCGACCATATCTCCCGGCTGAAGCGCGGCATCGTCATGCGCAAGCTGACAAAGGCGAAAAAACTGAAAGACGCGGGATGA
PROTEIN sequence
Length: 173
MTIRPIITAPDPRLKTVSEAVDRVNDSIRKLADDMVDSMYAADGIGLAAIQIGVPKRMLVMDLDQKDGGRNPRLFINPKVVWASEEMAKMEEGCLSVPEVWEDVERPARITAEYLDRDGALQTLEADGLLATCLQHEIDHLNGVLFIDHISRLKRGIVMRKLTKAKKLKDAG*