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SCNpilot_cont_300_bf_scaffold_1712_curated_23

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(19971..20525)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Amorphus coralli RepID=UPI00037278A6 similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 179.0
  • Bit_score: 191
  • Evalue 9.40e-46
Cold shock protein CspB {ECO:0000313|EMBL:CDO61280.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 180.0
  • Bit_score: 191
  • Evalue 7.70e-46
cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 176.0
  • Bit_score: 188
  • Evalue 2.50e-45

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGGGGCGTTGGGTTGGGATGAATACCGGGGTTGGAAGCTCGCAAAGCCTGGGCGAAGCTGCTTTGGAAGTCACAGGCCTTGTCAAATGGTTTGACCTCTCGAAGGGTTATGGCTTCATCAAACCATCAAGCGGTGCGGAAGGCGATGTCCTTCTGCATCAGACCTGCATTCGCCAGTCGGGCTTCAAGGCCGCCTATGAAGGCGCGAAGGTCGTGTGCGAAGCCGTGCAAGGCCCGAAGGGGCTGCAGGCGCGGCGGGTGATCTCGCTCGACAATTCGACGGCCGCATTACAGCCGGGCGCGACAGCGGCGCGGCCGCGTTTCGTCGCCGAACCGCACGGACCGGAGTTTGAGGCCACGGTGAAATGGTTCAATCGCGGCAAGGGTTATGGCTTTGTCTCGCGCGGGCCGGATACGCCGGACATCTTCATTCATATGGAAACGCTGCGCCGTTACGGCATTCGCGAACTCTTTCAGGGCCAGCGGGTGAAGGTGCGGGCGGGCGACGGCCCGAAGGGAGAGCTTGCGGCGGAGATTACGGTCGTCGATCCTTGA
PROTEIN sequence
Length: 185
MGRWVGMNTGVGSSQSLGEAALEVTGLVKWFDLSKGYGFIKPSSGAEGDVLLHQTCIRQSGFKAAYEGAKVVCEAVQGPKGLQARRVISLDNSTAALQPGATAARPRFVAEPHGPEFEATVKWFNRGKGYGFVSRGPDTPDIFIHMETLRRYGIRELFQGQRVKVRAGDGPKGELAAEITVVDP*