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SCNpilot_cont_300_bf_scaffold_3063_curated_10

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(6402..6710)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 102.0
  • Bit_score: 190
  • Evalue 9.60e-46
Elongation factor 4 n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I0A8_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 102.0
  • Bit_score: 190
  • Evalue 6.80e-46
GTP-binding protein LepA; K03596 GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 102.0
  • Bit_score: 190
  • Evalue 2.10e-46

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Taxonomy

Rhodomicrobium udaipurense → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
TCCATCATCGTGCATCGCGGCCGGGCAGAGGCCCGCGGCCGCACGATGTGCGAAAAGCTGAAAGAGCTGATCCCGCGCCATCTGTTCCAGATACCGATTCAGGCGGCGATCGGCGGCAAGGTGATCGCGCGCGAAACCATCAGCGCGCTCAGGAAAGACGTGACCGCCAAATGTTATGGCGGCGACATCAGCCGCAAACGCAAGCTTCTGGACAAGCAGAAGGAAGGCAAGAAGAAGATGCGCCAATTCGGGCGTGTCGAGATTCCGCAGGAAGCCTTCATCGCCGCGCTGAAGATGGATGGGGACTGA
PROTEIN sequence
Length: 103
SIIVHRGRAEARGRTMCEKLKELIPRHLFQIPIQAAIGGKVIARETISALRKDVTAKCYGGDISRKRKLLDKQKEGKKKMRQFGRVEIPQEAFIAALKMDGD*