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SCNpilot_expt_1000_bf_scaffold_4410_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4410_curated_1
unknown

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2..628
DNA (627bp) protein (209aa)
Uncharacterized protein {ECO:0000313|EMBL:CPR17866.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_expt_1000_bf_scaffold_4410_curated_2
Brucella sp. NVSL 07-0026, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(881..1066)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036FBC62
Putative uncharacterized protein {ECO:0000313|EMBL:EFG38309.2}; TaxID=520448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. NVSL 07-0026.;"
hypothetical protein; K09937 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4410_curated_3
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1063..1962)
DNA (900bp) protein (300aa)
hflC; HflC protein , modulator for HflB protease specific for phage lambda cII repressor; K04087 membrane protease subunit HflC [EC:3.4.-.-]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037338DE
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_4410_curated_4
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1965..3083)
DNA (1119bp) protein (373aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036ABB27
Membrane protein {ECO:0000313|EMBL:AHB49520.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_4410_curated_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3460..4722
DNA (1263bp) protein (421aa)
aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4]
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Aspartokinase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYB2_HYPDA
SCNpilot_expt_1000_bf_scaffold_4410_curated_6
unknown

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comp(4782..6401)
DNA (1620bp) protein (540aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4410_curated_7
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6626..7270
DNA (645bp) protein (215aa)
protein PtsP; K08484 phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037DF257
Tax=RBG_16_Alphaproteobacteria_64_48_curated
SCNpilot_expt_1000_bf_scaffold_4410_curated_8
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7291..8088
DNA (798bp) protein (266aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:CCB66175.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CCB66175.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J9V8_HYPSM
SCNpilot_expt_1000_bf_scaffold_4410_curated_9
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8139..9242
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003663715
Uncharacterized protein {ECO:0000313|EMBL:AHB50425.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_4410_curated_10
unknown

Not on your lists

9239..9625
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003663715
Uncharacterized protein {ECO:0000313|EMBL:CPR14890.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_expt_1000_bf_scaffold_4410_curated_11
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9859..12357
DNA (2499bp) protein (833aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000373416B
histidine kinase HK, ATPase and Sensor Domain
SCNpilot_expt_1000_bf_scaffold_4410_curated_12
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12354..13865
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037C61D6
Uncharacterized protein {ECO:0000313|EMBL:AHB49726.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein; K07102
SCNpilot_expt_1000_bf_scaffold_4410_curated_13
unknown

Not on your lists

comp(13739..14410)
DNA (672bp) protein (224aa)

This feature has no annotations

Displaying 13 items

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