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SCNpilot_expt_1000_bf_scaffold_10409_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10409_curated_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1082
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003775891
Uncharacterized protein {ECO:0000313|EMBL:AHB49387.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10409_curated_2
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1083..1952
DNA (870bp) protein (290aa)
Haloacid dehalogenase n=1 Tax=Burkholderia sp. SJ98 RepID=K8RI04_9BURK
Haloacid dehalogenase {ECO:0000313|EMBL:KHJ53519.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
HAD-superfamily hydrolase subfamily IA variant2
SCNpilot_expt_1000_bf_scaffold_10409_curated_3
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2137..2313)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SE40_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB48762.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10409_curated_4
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2510..3130
DNA (621bp) protein (207aa)
3'-5' exonuclease (EC:3.1.13.-); K03684 ribonuclease D [EC:3.1.13.5]
3'-5' exonuclease {ECO:0000313|EMBL:CCB63616.1}; EC=3.1.13.- {ECO:0000313|EMBL:CCB63616.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
3'-5' exonuclease n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8N9_HYPSM
SCNpilot_expt_1000_bf_scaffold_10409_curated_5
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3388..5304
DNA (1917bp) protein (639aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000378C108
Organic solvent tolerance protein OstA {ECO:0000313|EMBL:AHB47633.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
OstA family protein
SCNpilot_expt_1000_bf_scaffold_10409_curated_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5893..6141
DNA (249bp) protein (83aa)
Putative ABC transporter, ATPase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8N8_HYPSM
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADJ22220.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_10409_curated_7
unknown

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comp(6202..6366)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 7 items

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