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SCNpilot_expt_1000_bf_scaffold_6672_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6672_curated_1
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..309)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7L0_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65594.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_6672_curated_2
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(606..1043)
DNA (438bp) protein (146aa)
Putative phage cell wall peptidase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGU3_HYPSM
phage cell wall peptidase
Putative phage cell wall peptidase {ECO:0000313|EMBL:CCB65595.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_6672_curated_3
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1048..1950)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037A865E
Uncharacterized protein {ECO:0000313|EMBL:AHB49036.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6672_curated_4
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1947..2585)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGU4_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65597.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_6672_curated_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2594..3181)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGU5_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65598.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_6672_curated_6
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3191..3358)
DNA (168bp) protein (56aa)
Gene transfer agent (GTA) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RE12_PELHB
hypothetical protein
Gene transfer agent (GTA) {ECO:0000313|EMBL:AEQ50806.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_expt_1000_bf_scaffold_6672_curated_7
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3358..3759)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037508A8
Uncharacterized protein {ECO:0000313|EMBL:AHB49040.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6672_curated_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3770..4183)
DNA (414bp) protein (138aa)
tail protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035D12CD
Tail protein {ECO:0000313|EMBL:AHB49041.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
phage major tail protein, TP901-1 family
SCNpilot_expt_1000_bf_scaffold_6672_curated_9
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4210..4620)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SEW9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB49042.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6672_curated_10
unknown

Not on your lists

4651..4776
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6672_curated_11
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4794..5120)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003713792
Gene Transfer Agent (GTA) ORFG07 {ECO:0000313|EMBL:BAQ18000.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
Phage head-tail adaptor
SCNpilot_expt_1000_bf_scaffold_6672_curated_12
unknown

Not on your lists

comp(5120..5698)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037213BC
Uncharacterized protein {ECO:0000313|EMBL:CPR22025.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
phiE125 gp8 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6672_curated_13
unknown

Not on your lists

comp(5988..6383)
DNA (396bp) protein (132aa)
capsid protein n=1 Tax=Kaistia granuli RepID=UPI00037CE4AF
Phage major capsid protein {ECO:0000313|EMBL:CPR22026.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
phage major capsid protein
Displaying 13 items

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