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SCNpilot_expt_1000_bf_scaffold_19700_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_19700_curated_1
Vibrio tubiashii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..431
DNA (429bp) protein (143aa)
RNA polymerase subunit sigma-54 n=1 Tax=alpha proteobacterium SCGC AAA536-K22 RepID=UPI0003B67183
Membrane protein {ECO:0000313|EMBL:AIW16628.1}; TaxID=1051646 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio tubiashii ATCC 19109.;"
Putative transporter, DME family; K15270 S-adenosylmethionine uptake transporter
SCNpilot_expt_1000_bf_scaffold_19700_curated_2
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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581..1609
DNA (1029bp) protein (343aa)
carboxypeptidase; K01295 glutamate carboxypeptidase [EC:3.4.17.11]
M20 family peptidase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JQM1_9PROT
M20 family peptidase {ECO:0000313|EMBL:EKE76832.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_expt_1000_bf_scaffold_19700_curated_3
unknown

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comp(1775..2413)
DNA (639bp) protein (213aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_19700_curated_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2766..4049
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035CF229
Uncharacterized protein {ECO:0000313|EMBL:KKB80634.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
glycosyl transferase group 1
SCNpilot_expt_1000_bf_scaffold_19700_curated_5
unknown

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4161..5126
DNA (966bp) protein (322aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
malate dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031105B5
malate dehydrogenase, NAD-dependent
SCNpilot_expt_1000_bf_scaffold_19700_curated_6
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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5216..5452
DNA (237bp) protein (79aa)
endoribonuclease (EC:3.1.-.-); K07567 TdcF protein
Putative endoribonuclease L-PSP n=1 Tax=uncultured Acidilobus sp. JCHS RepID=V4K458_9CREN
Tax=GWC1_Treponema_61_84_curated
Displaying 6 items

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