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SCNpilot_expt_1000_bf_scaffold_7259_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7259_curated_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..642
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B154_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57209.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_7259_curated_2
unknown

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comp(507..845)
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7259_curated_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1194..2612
DNA (1419bp) protein (473aa)
Putative DNA or RNA helicase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAQ4_9RHIZ
Putative DNA or RNA helicase
Putative DNA or RNA helicase {ECO:0000313|EMBL:AGK57210.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_7259_curated_4
unknown

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comp(2636..3838)
DNA (1203bp) protein (401aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7259_curated_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4333..5400
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000364C8FA
Uncharacterized protein {ECO:0000313|EMBL:EHH05458.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
SCNpilot_expt_1000_bf_scaffold_7259_curated_6
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5760..7118
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EDT4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ60572.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7259_curated_7
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7448..8005)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BBK3_PARDP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL72897.1}; Flags: Precursor;; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
SCNpilot_expt_1000_bf_scaffold_7259_curated_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8405..9814
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NM28_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28595.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_7259_curated_9
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9976..10938)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3A0K4_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL24469.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7259_curated_10
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10931..11527)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2G472_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL24470.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7259_curated_11
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12308..12520
DNA (213bp) protein (71aa)
Antirestriction protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QE03_9BRAD
Antirestriction protein {ECO:0000313|EMBL:EIG58009.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
ardC; putative antirestriction protein
Displaying 11 items

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