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SCNpilot_expt_1000_bf_scaffold_6923_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6923_curated_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1..594
DNA (594bp) protein (198aa)
tartrate dehydrogenase (EC:4.1.1.73); K07246 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Tartrate dehydrogenase id=4468110 bin=GWC2_Methylomirabilis_70_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SCNpilot_expt_1000_bf_scaffold_6923_curated_2
unknown

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804..1019
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6923_curated_3
unknown

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1164..1472
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9F3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CPR20092.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6923_curated_4
unknown

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comp(1607..2176)
DNA (570bp) protein (190aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6923_curated_5
unknown

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comp(2254..2493)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6923_curated_6
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2842..3051)
DNA (210bp) protein (70aa)
Cold-shock protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAR9_9RHIZ
Cold-shock protein {ECO:0000313|EMBL:AHB47861.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
cold-shock DNA-binding domain-containing protein
SCNpilot_expt_1000_bf_scaffold_6923_curated_7
unknown

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3477..3695
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6923_curated_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3821..4438)
DNA (618bp) protein (206aa)
30S ribosomal protein S4 n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037F6503
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
SCNpilot_expt_1000_bf_scaffold_6923_curated_9
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4637..5503)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B574A5
Uncharacterized protein {ECO:0000313|EMBL:AJA09825.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6923_curated_10
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5496..6470)
DNA (975bp) protein (325aa)
Phage-related regulatory protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TGR3_MESCW
Phage-related regulatory protein {ECO:0000313|EMBL:AJA09824.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
phage-related regulatory protein
SCNpilot_expt_1000_bf_scaffold_6923_curated_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6628..7491
DNA (864bp) protein (288aa)
Putative threonine synthase (TS) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AR51_AZOBR
Threonine synthase {ECO:0000313|EMBL:AIB13915.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
putative threonine synthase (TS)
Displaying 11 items

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