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SCNpilot_expt_1000_bf_scaffold_9166_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9166_curated_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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363..704
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAF1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB47417.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9166_curated_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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810..2564
DNA (1755bp) protein (585aa)
NAD synthetase {ECO:0000313|EMBL:AHB49304.1}; EC=6.3.5.1 {ECO:0000313|EMBL:AHB49304.1};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036384A1
NAD+ synthetase
SCNpilot_expt_1000_bf_scaffold_9166_curated_3
unknown

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2777..3331
DNA (555bp) protein (185aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000313|EMBL:CPR21017.1};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamyl-tRNA synthetase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SD88_9RHIZ
SCNpilot_expt_1000_bf_scaffold_9166_curated_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3280..4143
DNA (864bp) protein (288aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000376FF7A
SCNpilot_expt_1000_bf_scaffold_9166_curated_5
unknown

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comp(4229..4903)
DNA (675bp) protein (225aa)
Uncharacterized protein {ECO:0000313|EMBL:CPR21019.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_expt_1000_bf_scaffold_9166_curated_6
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5148..6212)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037AF2B7
Uncharacterized protein {ECO:0000313|EMBL:AHB48451.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_9166_curated_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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6406..7113
DNA (708bp) protein (236aa)
polC; type III DNA polymerase PolC; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00036F7ABA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying 7 items

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