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SCNpilot_expt_1000_bf_scaffold_6313_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6313_curated_1
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1840..3168)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8G6_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65754.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_6313_curated_2

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3647..4309
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VMR5_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKM86979.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6313_curated_3
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4383..5336)
DNA (954bp) protein (318aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J4S6_HYPSM
dnaA; DNA replication initiator protein; K02313 chromosomal replication initiator protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_6313_curated_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6054..6494)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035D5ABF
rhodanese
Rhodanese {ECO:0000313|EMBL:AGK60036.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_6313_curated_5
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7142..7417)
DNA (276bp) protein (92aa)
30S ribosomal protein S20 n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IVN2_POLGS
formamidopyrimidine-DNA glycosylase; K02968 small subunit ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_expt_1000_bf_scaffold_6313_curated_6
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8866..9597)
DNA (732bp) protein (244aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
ABC transporter ATP-binding protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SHY3_9RHIZ
SCNpilot_expt_1000_bf_scaffold_6313_curated_7
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9606..10526)
DNA (921bp) protein (307aa)
Multidrug ABC transporter substrate-binding protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SHM2_9RHIZ
Multidrug ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHB49555.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
lipoprotein releasing system, transmembrane protein, LolC/E family; K09808 lipoprotein-releasing system permease protein
Displaying 7 items

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