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SCNpilot_expt_1000_bf_scaffold_12757_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12757_curated_1
unknown

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1..807
DNA (807bp) protein (269aa)
preprotein translocase subunit TatC n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036F6867
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902, ECO:0000313|EMBL:CPR20435.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
tatC; Sec-independent protein translocase; K03118 sec-independent protein translocase protein TatC
SCNpilot_expt_1000_bf_scaffold_12757_curated_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1095..1373
DNA (279bp) protein (93aa)
Uncharacterized protein n=3 Tax=Hyphomicrobium RepID=F8JF18_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ24285.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_12757_curated_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1555..1989)
DNA (435bp) protein (145aa)
MATE efflux family protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132Z3_RHOPS
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ABE40846.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_expt_1000_bf_scaffold_12757_curated_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2118..2945)
DNA (828bp) protein (276aa)
MATE efflux family protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZH7_RHOP2
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ABD06383.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_expt_1000_bf_scaffold_12757_curated_5
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3393..3869
DNA (477bp) protein (159aa)
chemotaxis protein CheY n=1 Tax=Pontibacter roseus RepID=UPI000365E4E5
Response regulator Rcp1 {ECO:0000313|EMBL:EFL87613.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;"
response regulator receiver protein
SCNpilot_expt_1000_bf_scaffold_12757_curated_6
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(3899..4897)
DNA (999bp) protein (333aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ71460.1}; Flags: Fragment;; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
SCNpilot_expt_1000_bf_scaffold_12757_curated_7
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5253..6173
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GNI2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV27530.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
Signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_12757_curated_8
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6186..7160)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002E53879
Uncharacterized protein {ECO:0000313|EMBL:EDP65115.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
Displaying 8 items

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