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SCNpilot_expt_1000_bf_scaffold_6537_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6537_curated_1
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..406)
DNA (405bp) protein (135aa)
flavin reductase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003689417
flavin reductase
Tax=BJP_IG2157_Desulfuromonadales_56_134
SCNpilot_expt_1000_bf_scaffold_6537_curated_2
unknown

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comp(424..663)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6537_curated_3
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(678..1508)
DNA (831bp) protein (277aa)
Short-chain dehydrogenase n=1 Tax=Moorea producens 3L RepID=F4XYC7_9CYAN
short-chain dehydrogenase/reductase SDR; K07124
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_expt_1000_bf_scaffold_6537_curated_4

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comp(1716..2027)
DNA (312bp) protein (104aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48798.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_1000_bf_scaffold_6537_curated_5
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2090..2473
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SIE8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB49825.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_6537_curated_6
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2526..2963
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003821EDE
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
UspA protein
SCNpilot_expt_1000_bf_scaffold_6537_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3084..3296)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037632BF
putative cation transport regulator
Putative cation transport regulator {ECO:0000313|EMBL:AGG89819.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_expt_1000_bf_scaffold_6537_curated_8
unknown

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3504..3698
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6537_curated_9
R_RIF_OD1_09_49_22, RIF-OD1-9, Parcubacteria, Bacteria

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3715..4338
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13CJ4_RHOPS
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_49_22_curated
SCNpilot_expt_1000_bf_scaffold_6537_curated_10
unknown

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4758..4925
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 10 items

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