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SCNpilot_expt_1000_bf_scaffold_10561_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10561_curated_1
unknown

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comp(1..192)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10561_curated_2
bacterium YEK0313, Bacteria

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430..813
DNA (384bp) protein (128aa)
UPI0003CFF175 related cluster n=1 Tax=unknown RepID=UPI0003CFF175
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CEJ10559.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
acyl-CoA dehydrogenase
SCNpilot_expt_1000_bf_scaffold_10561_curated_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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810..1979
DNA (1170bp) protein (390aa)
CaiB/baiF CoA-transferase family protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GUH8_CUPNN
CaiB/baiF CoA-transferase family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_expt_1000_bf_scaffold_10561_curated_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1976..3106
DNA (1131bp) protein (377aa)
Alpha-methylacyl-CoA racemase (EC:5.1.99.4)
Alpha-methylacyl-CoA racemase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QU3_RHOFD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_expt_1000_bf_scaffold_10561_curated_5
bacterium YEK0313, Bacteria

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3111..3614
DNA (504bp) protein (168aa)
Acyl dehydratase n=1 Tax=uncultured delta proteobacterium HF0130_05G09 RepID=E0XXP4_9DELT
Bifunctional protein PaaZ {ECO:0000313|EMBL:CEJ10556.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
MaoC domain-containing protein dehydratase
SCNpilot_expt_1000_bf_scaffold_10561_curated_6
Mycobacterium vulneris, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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4004..4357
DNA (354bp) protein (118aa)
Transcriptional regulator, GntR family with UTRA sensor domain n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I7N0_MYCRH
GntR family transcriptional regulator {ECO:0000313|EMBL:CDO32018.1}; TaxID=547163 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium vulneris.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_10561_curated_7
unknown

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comp(4932..5204)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10561_curated_8
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5649..6254
DNA (606bp) protein (202aa)
ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000381655B
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EIG59885.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_10561_curated_9
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6285..7298
DNA (1014bp) protein (338aa)
Dipeptide/oligopeptide/nickel ABC transporter permease n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z1Z3_9BRAD
dipeptide/oligopeptide/nickel ABC transporter permease
Dipeptide/oligopeptide/nickel ABC transporter permease {ECO:0000313|EMBL:BAM86656.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_expt_1000_bf_scaffold_10561_curated_10
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7295..7918
DNA (624bp) protein (208aa)
Peptide/nickel transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HHS1_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48580.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
dipeptide/oligopeptide/nickel ABC transporter permease
Displaying 10 items

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