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SCNpilot_expt_1000_bf_scaffold_7349_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7349_curated_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..154)
DNA (153bp) protein (51aa)
hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Histidinol dehydrogenase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BFA0_9RHIZ
SCNpilot_expt_1000_bf_scaffold_7349_curated_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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752..1606
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AAD5_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE58638.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
SCNpilot_expt_1000_bf_scaffold_7349_curated_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1476..1931)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JTW2_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ24510.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_7349_curated_4
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2130..2915
DNA (786bp) protein (262aa)
Putative oxidoreductase n=3 Tax=Bordetella RepID=Q7W4M0_BORPA
oxidoreductase rbh
Putative oxidoreductase {ECO:0000313|EMBL:CCN24634.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
SCNpilot_expt_1000_bf_scaffold_7349_curated_5
unknown

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2959..3489
DNA (531bp) protein (177aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
apt; adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
Adenine phosphoribosyltransferase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFS7_9RHIZ
SCNpilot_expt_1000_bf_scaffold_7349_curated_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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3501..4571
DNA (1071bp) protein (357aa)
Geranylgeranyl reductase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1C6_9RHOB
geranylgeranyl reductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCNpilot_expt_1000_bf_scaffold_7349_curated_7
unknown

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comp(4907..4996)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 7 items

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