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SCNpilot_expt_1000_bf_scaffold_10878_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10878_curated_1
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..143
DNA (141bp) protein (47aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
SCNpilot_expt_1000_bf_scaffold_10878_curated_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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406..621
DNA (216bp) protein (72aa)
Cold shock protein y4cH n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9M6_9RHIZ
cold shock protein y4cH
Cold shock protein y4cH {ECO:0000313|EMBL:AGK57241.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_10878_curated_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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801..1871
DNA (1071bp) protein (357aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JR51_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ24036.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_10878_curated_4
unknown

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comp(3515..5617)
DNA (2103bp) protein (701aa)
DNA polymerase III subunit epsilon; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III, epsilon subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPN3_9RHIZ
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:CPR18799.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_expt_1000_bf_scaffold_10878_curated_5
unknown

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comp(6231..6710)
DNA (480bp) protein (160aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10878_curated_6
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6889..7032
DNA (144bp) protein (48aa)
Poly (3-hydroxybutyrate) depolymerase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J4X5_HYPSM
poly (3-hydroxybutyrate) depolymerase
Poly (3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:CCB63296.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_10878_curated_7
unknown

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7204..7962
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000365DA67
Ribonuclease T2 {ECO:0000313|EMBL:CPR14832.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
ribonuclease T2
SCNpilot_expt_1000_bf_scaffold_10878_curated_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8130..8576
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGQ4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB50051.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_10878_curated_9
unknown

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8882..8968
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 9 items

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