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SCNpilot_expt_1000_bf_scaffold_6449_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6449_curated_1
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..965
DNA (963bp) protein (321aa)
sarcosine oxidase subunit beta; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] rbh
Sarcosine oxidase subunit beta n=1 Tax=Nitratireductor indicus C115 RepID=K2PMY6_9RHIZ
Sarcosine oxidase subunit beta {ECO:0000313|EMBL:EKF42442.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_1000_bf_scaffold_6449_curated_2
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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974..1276
DNA (303bp) protein (101aa)
sarcosine oxidase subunit delta; K00304 sarcosine oxidase, subunit delta [EC:1.5.3.1]
sarcosine oxidase subunit delta n=1 Tax=Xanthobacteraceae RepID=UPI00037C0191
Sarcosine oxidase, delta subunit, heterotetrameric {ECO:0000313|EMBL:ADZ70377.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_expt_1000_bf_scaffold_6449_curated_3
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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1276..4284
DNA (3009bp) protein (1003aa)
sarcosine oxidase subunit alpha; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]
Putative sarcosine oxidase alpha subunit transmembrane protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWQ1_POLGS
Putative sarcosine oxidase alpha subunit transmembrane protein {ECO:0000313|EMBL:ADZ70376.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_expt_1000_bf_scaffold_6449_curated_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5473..5631
DNA (159bp) protein (53aa)
amidohydrolase 2 id=2319316 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_expt_1000_bf_scaffold_6449_curated_5
unknown

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comp(6163..6300)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6449_curated_6
unknown

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comp(6322..6429)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6449_curated_7
unknown

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comp(6544..6759)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6449_curated_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7467..8294)
DNA (828bp) protein (276aa)
3'(2'),5'-bisphosphate nucleotidase; K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
Inositol monophosphatase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SHG1_9RHIZ
Inositol monophosphatase {ECO:0000313|EMBL:AHB49500.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_6449_curated_9
unknown

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8563..9204
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003614F2E
Uncharacterized protein {ECO:0000313|EMBL:CPR14760.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein; K13588 histidine phosphotransferase ChpT
SCNpilot_expt_1000_bf_scaffold_6449_curated_10
unknown

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comp(9336..9536)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6449_curated_11
unknown

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comp(9747..10427)
DNA (681bp) protein (227aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6449_curated_12
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10772..11383
DNA (612bp) protein (204aa)
CzcN domain-containing protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSN2_HYPDA
CzcN domain-containing protein
Tax=RBG_16_Alphaproteobacteria_64_48_curated
SCNpilot_expt_1000_bf_scaffold_6449_curated_13
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11741..12190)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D8H3_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KJC56489.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
Displaying 13 items

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