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SCNpilot_expt_1000_bf_scaffold_3030_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3030_curated_1
unknown

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126..485
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3030_curated_2
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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528..1679
DNA (1152bp) protein (384aa)
acyl-CoA dehydrogenase (EC:1.3.99.3); K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Acyl-CoA dehydrogenase n=1 Tax=Pseudomonas sp. M47T1 RepID=I4N980_9PSED
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EIK98020.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;"
SCNpilot_expt_1000_bf_scaffold_3030_curated_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(1820..2920)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LNQ3_HALO1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
SCNpilot_expt_1000_bf_scaffold_3030_curated_4
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2927..3196)
DNA (270bp) protein (90aa)
ThiamineS n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LNQ2_HALO1
sulfur transfer protein
ThiamineS {ECO:0000313|EMBL:ACY16957.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
SCNpilot_expt_1000_bf_scaffold_3030_curated_5
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(3219..3704)
DNA (486bp) protein (162aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XN85_SORCE
3-demethylubiquinone-9 3-methyltransferase
Tax=BJP_IG2157_Anaerolineales_55_23
SCNpilot_expt_1000_bf_scaffold_3030_curated_6
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3708..4127)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI00037CEEDB
Extradiol dioxygenase {ECO:0000313|EMBL:AKH83375.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K07032
SCNpilot_expt_1000_bf_scaffold_3030_curated_7
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4180..4530)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Halomonas sp. KM-1 RepID=UPI000288C7DB
RNA signal recognition particle 4.5S RNA {ECO:0000313|EMBL:KJS08594.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3030_curated_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4568..4996)
DNA (429bp) protein (143aa)
Glyoxalase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FL90_9RHIZ
Glyoxalase {ECO:0000313|EMBL:KGM31088.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_expt_1000_bf_scaffold_3030_curated_9
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5083..6366)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EFD78D
Uncharacterized protein {ECO:0000313|EMBL:ESY78925.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
putative ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_1000_bf_scaffold_3030_curated_10
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6363..6734)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ERJ1_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ38785.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_expt_1000_bf_scaffold_3030_curated_11
unknown

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6878..7195
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3030_curated_12
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7207..8082)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000370A350
Uncharacterized protein {ECO:0000313|EMBL:AHB48613.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3030_curated_13
unknown

Not on your lists

8242..8589
DNA (348bp) protein (116aa)

This feature has no annotations

Displaying 13 items

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