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SCNpilot_expt_1000_bf_scaffold_8058_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8058_curated_1
unknown

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3..236
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8058_curated_2
unknown

Not on your lists

507..824
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8058_curated_3
unknown

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comp(958..1329)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8058_curated_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1535..2407
DNA (873bp) protein (291aa)
MATE efflux family protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07SR7_RHOP5
MATE efflux family protein; K03327 multidrug resistance protein, MATE family
MATE efflux family protein {ECO:0000313|EMBL:ABJ05017.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_expt_1000_bf_scaffold_8058_curated_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3234..3554
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TS98_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_8058_curated_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3622..4437)
DNA (816bp) protein (272aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q090Y3_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KDP73790.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8058_curated_7
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4530..5003)
DNA (474bp) protein (158aa)
ABC transporter substrate-binding protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI000346E6D2
Periplasmic binding protein {ECO:0000313|EMBL:KGQ17781.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_8058_curated_8
unknown

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5082..5360
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8058_curated_9
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5354..6202)
DNA (849bp) protein (283aa)
2-methylisocitrate lyase n=1 Tax=Burkholderia sp. YI23 RepID=G8MM29_9BURK
2-methylisocitrate lyase {ECO:0000313|EMBL:BAO92786.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
2-methylisocitrate lyase
SCNpilot_expt_1000_bf_scaffold_8058_curated_10
Mesorhizobium sp. UASWS1009, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6670..7251
DNA (582bp) protein (194aa)
DNA invertase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037C7662
Contig107, whole genome shotgun sequence {ECO:0000313|EMBL:KIU57134.1}; TaxID=1566387 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. UASWS1009.;"
TniR protein
SCNpilot_expt_1000_bf_scaffold_8058_curated_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7457..8008)
DNA (552bp) protein (184aa)
Uncharacterized protein id=2017323 bin=GWB2_Proteobacteria_55_19 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:EKS34477.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8058_curated_12
unknown

Not on your lists

comp(8024..8338)
DNA (315bp) protein (105aa)
Transcriptional regulator, XRE family id=2017326 bin=GWB2_Proteobacteria_55_19 species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
SCNpilot_expt_1000_bf_scaffold_8058_curated_13
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

8489..9259
DNA (771bp) protein (257aa)
Putative uncharacterized protein id=2017365 bin=GWB2_Proteobacteria_55_19 species=Leptolyngbya sp. PCC 7375 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
Tax=BJP_IG2102_BRC1_58_13
Displaying 13 items

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