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SCNpilot_expt_1000_bf_scaffold_4227_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4227_curated_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1128)
DNA (1128bp) protein (376aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
threonyl-tRNA synthetase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036D4320
SCNpilot_expt_1000_bf_scaffold_4227_curated_2
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1218..1718)
DNA (501bp) protein (167aa)
Aha1 domain family protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D6Y5_MYXXD
ATPase {ECO:0000313|EMBL:KIL34415.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
Aha1 domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4227_curated_3
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1720..2106
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000370AE8D
hypothetical protein
Tax=RBG_16_Alphaproteobacteria_64_48_curated
SCNpilot_expt_1000_bf_scaffold_4227_curated_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2340..4127
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BFK9_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59251.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_4227_curated_5
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4128..5006
DNA (879bp) protein (293aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0TB69_9BRAD
SCNpilot_expt_1000_bf_scaffold_4227_curated_6
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5163..6782
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R9Q3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR22886.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
von Willebrand factor A
Displaying 6 items

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