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SCNpilot_expt_1000_bf_scaffold_7758_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7758_curated_1
unknown

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1..237
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7758_curated_2
unknown

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535..1440
DNA (906bp) protein (302aa)
FAD dependent oxidoreductase; K03153 glycine oxidase [EC:1.4.3.19]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000367050C
Putative thiamine biosynthesis oxidoreductase ThiO {ECO:0000313|EMBL:CPR22615.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_expt_1000_bf_scaffold_7758_curated_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1471..2520
DNA (1050bp) protein (350aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6AVJ2_RHILS
fumarylacetoacetate (FAA) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:ACS55803.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCNpilot_expt_1000_bf_scaffold_7758_curated_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2556..3146)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003614D9A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ06557.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_expt_1000_bf_scaffold_7758_curated_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3437..3916
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2IN42_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE71586.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_expt_1000_bf_scaffold_7758_curated_6
unknown

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4172..4645
DNA (474bp) protein (158aa)
Cation antiporter n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R978_9RHIZ
Cation antiporter {ECO:0000313|EMBL:CPR22446.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
Na+/H+ ion antiporter subunit
SCNpilot_expt_1000_bf_scaffold_7758_curated_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4645..4923
DNA (279bp) protein (93aa)
Multiple resistance and pH regulation protein F n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QSJ4_9RHIZ
multiple resistance and pH regulation protein F; K05570 multicomponent Na+:H+ antiporter subunit F
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_7758_curated_8
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5517..5876
DNA (360bp) protein (120aa)
PH adaptation potassium efflux system protein B1 n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RBH2_9RHIZ
PH adaptation potassium efflux system protein B1 {ECO:0000313|EMBL:ESR22754.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
putative multicomponent Na+-H+ antiporter subunit A
SCNpilot_expt_1000_bf_scaffold_7758_curated_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5873..6289
DNA (417bp) protein (139aa)
Putative Na(+) H(+) antiporter subunit B n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RHK7_9RHIZ
Na+/H+ antiporter MnhB subunit-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_7758_curated_10
unknown

Not on your lists

6289..6654
DNA (366bp) protein (122aa)
PH adaptation potassium efflux system protein C n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R983_9RHIZ
PH adaptation potassium efflux system protein C {ECO:0000313|EMBL:CPR22451.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
multisubunit sodium/proton antiporter subunit MrpC; K05567 multicomponent Na+:H+ antiporter subunit C
SCNpilot_expt_1000_bf_scaffold_7758_curated_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6651..8144
DNA (1494bp) protein (498aa)
NADH dehydrogenase (Quinone) n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QSK0_9RHIZ
putative monovalent cation/H+ antiporter subunit D; K05568 multicomponent Na+:H+ antiporter subunit D
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_7758_curated_12
unknown

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comp(9230..9328)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7758_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9624..9878
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RBH6_9RHIZ
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_7758_curated_14
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10247..10456
DNA (210bp) protein (70aa)
NADH-ubiquinone oxidoreductase chain L {ECO:0000313|EMBL:ESR22760.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ESR22760.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
NADH dehydrogenase (Quinone) (EC:1.6.99.5); K05568 multicomponent Na+:H+ antiporter subunit D
NADH-ubiquinone oxidoreductase chain L n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RHL2_9RHIZ
Displaying 14 items

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