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SCNpilot_expt_1000_bf_scaffold_16818_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_16818_curated_1
unknown

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comp(123..218)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_16818_curated_2
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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416..1399
DNA (984bp) protein (328aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003630089
Lipid A biosynthesis lauroyl acyltransferase {ECO:0000313|EMBL:BAQ17375.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
SCNpilot_expt_1000_bf_scaffold_16818_curated_3
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1674..1946
DNA (273bp) protein (91aa)
carbon-carbon lyase (EC:4.1.3.34); K08691 malyl-CoA lyase [EC:4.1.3.24]
aldolase n=1 Tax=Pannonibacter phragmitetus RepID=UPI00035C799A
HpcH/HpaI aldolase/citrate lyase family, putative {ECO:0000313|EMBL:EEE47716.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
SCNpilot_expt_1000_bf_scaffold_16818_curated_4
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2008..2571
DNA (564bp) protein (188aa)
carbon-carbon lyase (EC:4.1.3.34); K08691 malyl-CoA lyase [EC:4.1.3.24]
Putative carbon-carbon lyase, HpcH/HpaI aldolase/citrate lyase family {ECO:0000313|EMBL:CCB65163.1}; EC=4.1.3.34 {ECO:0000313|EMBL:CCB65163.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
aldolase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000378B885
SCNpilot_expt_1000_bf_scaffold_16818_curated_5
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3076..3567
DNA (492bp) protein (164aa)
Porin n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IH97_XANP2
porin
Porin {ECO:0000313|EMBL:ABS67390.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_16818_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4073..4489
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A9E891
Uncharacterized protein {ECO:0000313|EMBL:KFC73956.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_16818_curated_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4537..5238
DNA (702bp) protein (234aa)
Methyltransferase {ECO:0000313|EMBL:CDP51784.1}; EC=2.1.1.- {ECO:0000313|EMBL:CDP51784.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
RNA methylase n=1 Tax=Gluconobacter morbifer G707 RepID=G6XG61_9PROT
RNA methylase
Displaying 7 items

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