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SCNpilot_expt_1000_bf_scaffold_6619_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6619_curated_1
unknown

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comp(2..91)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6619_curated_2
unknown

Not on your lists

comp(145..372)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6619_curated_3
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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599..1402
DNA (804bp) protein (268aa)
Opine oxidase subunit A (Octopine oxidase subunit A) {ECO:0000313|EMBL:CCE09723.1}; EC=1.-.-.- {ECO:0000313|EMBL:CCE09723.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Opine oxidase subunit A (Octopine oxidase subunit A) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTD5_9BRAD
BFD-like protein
SCNpilot_expt_1000_bf_scaffold_6619_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1510..2148)
DNA (639bp) protein (213aa)
y4uB; hypothetical protein; K15785 L-2,4-diaminobutyrate transaminase [EC:2.6.1.-]
aminotransferase n=1 Tax=Rhizobium giardinii RepID=UPI0003752A4E
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:KFC70870.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_6619_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2139..2687)
DNA (549bp) protein (183aa)
Uncharacterized aminotransferase y4uB (EC:2.6.1.-)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HC25_RHIRD
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:KFC70870.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_6619_curated_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(3685..5388)
DNA (1704bp) protein (568aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] id=14625563 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14]
Tax=CSP1_6_Rokubacteria
SCNpilot_expt_1000_bf_scaffold_6619_curated_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(5414..7504)
DNA (2091bp) protein (697aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] id=14625564 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14]
Tax=CSP1_6_Rokubacteria
SCNpilot_expt_1000_bf_scaffold_6619_curated_8
bacterium YEK0313, Bacteria

Not on your lists

7646..8500
DNA (855bp) protein (285aa)
UPI0003CDFA9C related cluster n=1 Tax=unknown RepID=UPI0003CDFA9C
Glycerol operon regulatory protein {ECO:0000313|EMBL:CEJ13566.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
IclR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_6619_curated_9
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8533..9402)
DNA (870bp) protein (290aa)
transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037EC147
Transporter {ECO:0000313|EMBL:KGJ02913.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_6619_curated_10
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9553..10908
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035D6C35
Bradyrhizobium elkanii strain UASWS1015 Contig169, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50634.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_6619_curated_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10938..11627
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUM2_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS63605.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_6619_curated_12
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11828..12346
DNA (519bp) protein (173aa)
adenosylcobinamide kinase; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
Adenosylcobinamide kinase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SD74_9RHIZ
Adenosylcobinamide kinase {ECO:0000313|EMBL:AHB48483.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Displaying 12 items

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