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SCNpilot_expt_1000_bf_scaffold_8547_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8547_curated_1
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..990)
DNA (990bp) protein (330aa)
Permease of the major facilitator superfamily protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP39_9PROT
major facilitator superfamily permease
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCNpilot_expt_1000_bf_scaffold_8547_curated_2
unknown

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comp(1131..2321)
DNA (1191bp) protein (397aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00038022AD
2-polyprenylphenol 6-hydroxylase; K03688 ubiquinone biosynthesis protein
SCNpilot_expt_1000_bf_scaffold_8547_curated_3
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2917..4179
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCM8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB47724.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; K09974 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8547_curated_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4184..5260)
DNA (1077bp) protein (359aa)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63]
Biotin/lipoate A/B protein ligase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JT21_HYPDA
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:ADJ22506.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_8547_curated_5
unknown

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comp(5554..5772)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8547_curated_6
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6627..6836
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002EFD558
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ABR64008.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_expt_1000_bf_scaffold_8547_curated_7
unknown

Not on your lists

6933..7565
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00036A0FAC
Uncharacterized protein {ECO:0000313|EMBL:CPR17363.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8547_curated_8
unknown

Not on your lists

comp(7724..8398)
DNA (675bp) protein (225aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8547_curated_9
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8546..9655
DNA (1110bp) protein (370aa)
Acyltransferase 3 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J5F6_HYPSM
acyltransferase
Acyltransferase 3 {ECO:0000313|EMBL:CCB67065.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_8547_curated_10
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9732..10379)
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JWH7_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ23090.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_8547_curated_11
unknown

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comp(11253..11348)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8547_curated_12
unknown

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comp(11499..11801)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8547_curated_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12171..12659
DNA (489bp) protein (163aa)
damage-inducible protein n=1 Tax=Afipia birgiae RepID=UPI0002F74784
Competence/damage-inducible protein CinA {ECO:0000313|EMBL:EKS35878.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
competence-damaged inducible protein
SCNpilot_expt_1000_bf_scaffold_8547_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12661..13329)
DNA (669bp) protein (223aa)
Putative major facilitator superfamily transporter n=1 Tax=Vibrio halioticoli NBRC 102217 RepID=V5FCF8_9VIBR
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KFC64133.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
major facilitator family transporter
SCNpilot_expt_1000_bf_scaffold_8547_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13323..13874)
DNA (552bp) protein (184aa)
membrane protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037C0F2F
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KFC64133.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
major facilitator superfamily permease
SCNpilot_expt_1000_bf_scaffold_8547_curated_16
unknown

Not on your lists

comp(14183..14407)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8547_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14404..14904)
DNA (501bp) protein (167aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F696_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_8547_curated_18
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15259..15411)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGN7_HYPSM
hypothetical protein; K09919 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB64346.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_8547_curated_19
unknown

Not on your lists

15714..15959
DNA (246bp) protein (82aa)

This feature has no annotations

Displaying 19 items

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