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SCNpilot_expt_1000_bf_scaffold_5892_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5892_curated_1
unknown

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comp(1..261)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5892_curated_2
unknown

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comp(1478..1663)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5892_curated_3
unknown

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comp(1927..2109)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5892_curated_4
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2206..2943
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Legionella pneumophila (strain Lens) RepID=Q5WSL1_LEGPL
Uncharacterized protein {ECO:0000313|EMBL:KJV35832.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5892_curated_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3261..4442
DNA (1182bp) protein (394aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQA1_NITHX
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABE61596.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_1000_bf_scaffold_5892_curated_6
unknown

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comp(4713..4919)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5892_curated_7
unknown

Not on your lists

5605..5730
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5892_curated_8
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5776..6621
DNA (846bp) protein (282aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (EC:4.1.1.68)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000376D6E3
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_expt_1000_bf_scaffold_5892_curated_9
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6880..8154)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7LFW0_NOCAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR09764.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
SCNpilot_expt_1000_bf_scaffold_5892_curated_10
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8503..9057
DNA (555bp) protein (185aa)
NADH dehydrogenase subunit G {ECO:0000313|EMBL:AHB49569.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AHB49569.1};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
NADH dehydrogenase subunit G; K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000373B000
SCNpilot_expt_1000_bf_scaffold_5892_curated_11
unknown

Not on your lists

9073..10131
DNA (1059bp) protein (353aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.5.3); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit H n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGA6_9RHIZ
SCNpilot_expt_1000_bf_scaffold_5892_curated_12
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10169..10657
DNA (489bp) protein (163aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.5.3); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3]
NADH dehydrogenase subunit I n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGE0_9RHIZ
SCNpilot_expt_1000_bf_scaffold_5892_curated_13
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10719..11054
DNA (336bp) protein (112aa)
nuoJ; NADH dehydrogenase I subunit J transmembrane protein; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3]
Probable NADH dehydrogenase I chain J transmembrane protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IY00_POLGS
Probable NADH dehydrogenase I chain J transmembrane protein {ECO:0000313|EMBL:ADZ70503.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Displaying 13 items

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