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SCNpilot_expt_1000_bf_scaffold_12141_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12141_curated_1
Rhizobium sp. NT-26, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..315
DNA (315bp) protein (105aa)
Putative heavy-metal cation efflux protein putative Co/Zn/Cd cation transport ATPase n=1 Tax=Rhizobium sp. RepID=L0NM89_RHISP
Putative heavy-metal cation efflux protein putative Co/Zn/Cd cation transport ATPase {ECO:0000313|EMBL:CCF22198.1}; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. NT-26.;"
Co/Zn/Cd efflux system component
SCNpilot_expt_1000_bf_scaffold_12141_curated_2

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comp(263..721)
DNA (459bp) protein (153aa)
Conjugation TrbI family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ID99_XANP2
Marine sediment metagenome DNA, contig: S03H2_L07525 {ECO:0000313|EMBL:GAH42884.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
SCNpilot_expt_1000_bf_scaffold_12141_curated_3
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(974..1105)
DNA (132bp) protein (44aa)
P-type conjugative transfer protein TrbG n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJD2_XANP2
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
Conjugal transfer protein TrbG {ECO:0000313|EMBL:KKC25930.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
SCNpilot_expt_1000_bf_scaffold_12141_curated_4
unknown

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comp(3726..3851)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12141_curated_5
unknown

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comp(4327..4674)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12141_curated_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4768..5310
DNA (543bp) protein (181aa)
ATP /GTP binding protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631A0E
ATP-binding protein {ECO:0000313|EMBL:KKB09470.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_12141_curated_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5285..7495
DNA (2211bp) protein (737aa)
DEAD/DEAH box helicase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZHM6_9BRAD
DEAD/DEAH box helicase {ECO:0000313|EMBL:KKB09471.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
DEAD/DEAH box helicase
SCNpilot_expt_1000_bf_scaffold_12141_curated_8
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7681..7914
DNA (234bp) protein (78aa)
nuclease n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B5695E
hypothetical protein; K06860 uncharacterized protein
Tax=BJP_IG2102_Porphyrobacter_62_18
Displaying 8 items

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