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SCNpilot_expt_1000_bf_scaffold_13560_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_13560_curated_1
unknown

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comp(3..86)
DNA (84bp) protein (28aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_13560_curated_2
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(256..1098)
DNA (843bp) protein (281aa)
Taurine ABC transporter permease n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2IXY4_9BURK
binding-protein-dependent transport systems inner membrane component; K15552 taurine transport system permease protein
Taurine ABC transporter permease {ECO:0000313|EMBL:ESJ22827.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
SCNpilot_expt_1000_bf_scaffold_13560_curated_3
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1113..1928)
DNA (816bp) protein (272aa)
taurine transport ATP-binding protein tauB; K10831 taurine transport system ATP-binding protein [EC:3.6.3.36]
ABC transporter related n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WWD2_COMTE
Nitrate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGH30316.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
SCNpilot_expt_1000_bf_scaffold_13560_curated_4
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1969..2985)
DNA (1017bp) protein (339aa)
Taurine ABC transporter, periplasmic binding protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PSH1_9RHOO
tauA; taurine ABC transporter, periplasmic binding protein
Taurine ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:BAL24913.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_expt_1000_bf_scaffold_13560_curated_5
unknown

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3015..3605
DNA (591bp) protein (197aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_13560_curated_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3565..4518)
DNA (954bp) protein (318aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EKE69508.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EKE69508.1};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ilvE; branched-chain amino acid aminotransferase 1; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
Branched-chain amino acid aminotransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J335_9PROT
SCNpilot_expt_1000_bf_scaffold_13560_curated_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4600..4854)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JWI6_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ23099.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_13560_curated_8
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4999..5337)
DNA (339bp) protein (113aa)
succinate semialdehyde dehydrogenase (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinate semialdehyde dehydrogenase {ECO:0000313|EMBL:ABE34006.1}; EC=1.2.1.16 {ECO:0000313|EMBL:ABE34006.1};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
hypothetical protein, partial n=1 Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI0003611BD1
SCNpilot_expt_1000_bf_scaffold_13560_curated_9
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5735..6070
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A4106
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Displaying 9 items

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