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SCNpilot_expt_1000_bf_scaffold_3555_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3555_curated_1
unknown

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2..148
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3555_curated_2
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1810..2616
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JN61_BURP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA48800.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1710b).;"
SCNpilot_expt_1000_bf_scaffold_3555_curated_3
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2592..3836)
DNA (1245bp) protein (415aa)
Type I secretion adaptor protein hlyD n=1 Tax=Caulobacter crescentus (strain NA1000 / CB15N) RepID=B8H161_CAUCN
hylD; type I secretion adaptor protein hlyD; K13408 membrane fusion protein RaxA
Auxiliary transport protein, MFP family {ECO:0000313|EMBL:EDX82089.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
SCNpilot_expt_1000_bf_scaffold_3555_curated_4
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3886..5406)
DNA (1521bp) protein (507aa)
adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1]
Adenylate/guanylate cyclase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEL3_METS4
Adenylate/guanylate cyclase {ECO:0000313|EMBL:ACA16753.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_expt_1000_bf_scaffold_3555_curated_5
unknown

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comp(5557..5733)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3555_curated_6
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6313..7347)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XW52_ALCXX
Uncharacterised protein {ECO:0000313|EMBL:CRD88295.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3555_curated_7
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7411..8415)
DNA (1005bp) protein (335aa)
Uncharacterised protein {ECO:0000313|EMBL:CRD80238.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_expt_1000_bf_scaffold_3555_curated_8
unknown

Not on your lists

9382..10245
DNA (864bp) protein (288aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:CPR20614.1}; EC=2.3.1.8 {ECO:0000313|EMBL:CPR20614.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BHD4_9RHIZ
SCNpilot_expt_1000_bf_scaffold_3555_curated_9
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10249..11463
DNA (1215bp) protein (405aa)
acetate kinase; K00925 acetate kinase [EC:2.7.2.1]
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003716757
SCNpilot_expt_1000_bf_scaffold_3555_curated_10
unknown

Not on your lists

comp(11580..11747)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3555_curated_11
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12439..13071
DNA (633bp) protein (211aa)
Hypothetical oxidoreductase with iron-sulfur subunit n=1 Tax=Rhizobium sp. (strain NGR234) RepID=Q6W1G7_RHISN
Aldehyde or xanthine dehydrogenase, iron-sulfur subunit protein {ECO:0000313|EMBL:KEC81213.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hypothetical oxidoreductase with iron-sulfur subunit; K13483 xanthine dehydrogenase YagT iron-sulfur-binding subunit
SCNpilot_expt_1000_bf_scaffold_3555_curated_12
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13829..14002
DNA (174bp) protein (58aa)
yagS1; xanthine dehydrogenase YagS FAD-binding subunit (EC:1.17.1.4)
Hydroxylase molybdopterin-containing subunit n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HMK9_9RHIZ
Hydroxylase molybdopterin-containing subunit {ECO:0000313|EMBL:EPE99799.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
SCNpilot_expt_1000_bf_scaffold_3555_curated_13
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14296..16224
DNA (1929bp) protein (643aa)
aerobic-type carbon monoxide dehydrogenase; K11177 xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
acylaldehyde oxidase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D582BE
Oxidoreductase {ECO:0000313|EMBL:KEC81211.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
SCNpilot_expt_1000_bf_scaffold_3555_curated_14
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16333..16968)
DNA (636bp) protein (212aa)
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hypho
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JPX2_HYPDA
Displaying 14 items

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