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SCNpilot_expt_1000_bf_scaffold_1256_curated

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1256_curated_1
unknown

Not on your lists

225..383
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1256_curated_2
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

539..838
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2HXI4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJL48240.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_curated_3
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(875..3355)
DNA (2481bp) protein (827aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2RTT2_9RHIZ
Restriction endonuclease subunit R {ECO:0000313|EMBL:KGE79862.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_curated_4
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3519..3683
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F286_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS53215.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_curated_5
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4057..5253
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q1T3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57679.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_curated_6
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5594..6571
DNA (978bp) protein (326aa)
GHMP kinase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F284_9RHIZ
GHMP kinase {ECO:0000313|EMBL:EHS53213.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
GHMP kinase
SCNpilot_expt_1000_bf_scaffold_1256_curated_7
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6568..7569
DNA (1002bp) protein (334aa)
Pyridoxal-5'-phosphate-dependent protein subunit beta n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QRL7_9RHIZ
Pyridoxal-5'-phosphate-dependent protein subunit beta {ECO:0000313|EMBL:EKF57677.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
Pyridoxal-5'-phosphate-dependent protein beta subunit
SCNpilot_expt_1000_bf_scaffold_1256_curated_8
unknown

Not on your lists

comp(7771..7866)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1256_curated_9
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7883..8338)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F281_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS53210.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_curated_10
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8341..8580)
DNA (240bp) protein (80aa)
Prevent-host-death family protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PY38_9RHIZ
Prevent-host-death family protein {ECO:0000313|EMBL:EKF57675.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
prevent-host-death family protein
SCNpilot_expt_1000_bf_scaffold_1256_curated_11
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8800..10299)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F279_9RHIZ
Transporter {ECO:0000313|EMBL:KJF71761.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
Uncharacterized 52.8 kDa protein in TAR-I ttuC' 3'region
SCNpilot_expt_1000_bf_scaffold_1256_curated_12
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10299..10724)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2P9U5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57673.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
conserved membrane protein of unknown function
SCNpilot_expt_1000_bf_scaffold_1256_curated_13
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10721..11689)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F277_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS53206.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_curated_14
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11745..12992)
DNA (1248bp) protein (416aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1]
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F276_9RHIZ
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:EHS53205.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
SCNpilot_expt_1000_bf_scaffold_1256_curated_15
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12992..14182)
DNA (1191bp) protein (397aa)
Peptidase M24 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F275_9RHIZ
Peptidase M24 {ECO:0000313|EMBL:EHS53204.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
peptidase M24
SCNpilot_expt_1000_bf_scaffold_1256_curated_16
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14172..14969)
DNA (798bp) protein (266aa)
Regulatory protein IclR n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q1S0_9RHIZ
Regulatory protein IclR {ECO:0000313|EMBL:EKF57669.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
Regulatory protein IclR
SCNpilot_expt_1000_bf_scaffold_1256_curated_17
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15877..16101
DNA (225bp) protein (75aa)
Transcriptional regulator, LuxR family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F272_9RHIZ
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJF71793.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
Transcriptional regulator, LuxR family
SCNpilot_expt_1000_bf_scaffold_1256_curated_18
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16225..16482
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F271_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS53200.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
SCNpilot_expt_1000_bf_scaffold_1256_curated_19
unknown

Not on your lists

comp(16781..17041)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1256_curated_20
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17200..17472
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F269_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS53198.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_curated_21
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17490..18365
DNA (876bp) protein (292aa)
Replication initiator protein A n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F268_9RHIZ
RepA replication protein {ECO:0000313|EMBL:KJF71753.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
replication protein
SCNpilot_expt_1000_bf_scaffold_1256_curated_22
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18686..19144
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QRK3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57662.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_curated_23
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19141..19698
DNA (558bp) protein (186aa)
Peptidase S26, conserved region n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F266_9RHIZ
Peptidase {ECO:0000313|EMBL:KJF71751.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
conjugal transfer protein
SCNpilot_expt_1000_bf_scaffold_1256_curated_24
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19734..20060
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F265_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJF71750.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1256_curated_25
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20297..21073
DNA (777bp) protein (259aa)
Lytic transglycosylase catalytic n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F264_9RHIZ
Lytic transglycosylase catalytic {ECO:0000313|EMBL:EHS53193.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
lytic transglycosylase, catalytic
SCNpilot_expt_1000_bf_scaffold_1256_curated_26
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21536..22069
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3V6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU15023.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
Displaying 26 items

View Taxonomy