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SCNpilot_expt_1000_bf_scaffold_9545_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9545_curated_1
unknown

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comp(2..160)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9545_curated_2
unknown

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comp(494..703)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9545_curated_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1185..1553
DNA (369bp) protein (123aa)
integral membrane sensor signal transduction histidine kinase; K14980 two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRB2_HYPDA
SCNpilot_expt_1000_bf_scaffold_9545_curated_4
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1844..3094
DNA (1251bp) protein (417aa)
Arabinose efflux permease family protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKB1_AZOSU
arabinose efflux permease family protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
SCNpilot_expt_1000_bf_scaffold_9545_curated_5
unknown

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comp(3101..4021)
DNA (921bp) protein (307aa)
Agmatinase {ECO:0000313|EMBL:CPR21886.1}; EC=3.5.3.11 {ECO:0000313|EMBL:CPR21886.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
speB; agmatinase (EC:3.5.3.11); K01480 agmatinase [EC:3.5.3.11]
Agmatinase n=1 Tax=Coxiella burnetii (strain Dugway 5J108-111) RepID=A9KDQ9_COXBN
SCNpilot_expt_1000_bf_scaffold_9545_curated_6
R_NC10_66_22, NC10, Bacteria

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4177..5118
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P748_9BRAD
oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCNpilot_expt_1000_bf_scaffold_9545_curated_7
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5593..6315
DNA (723bp) protein (241aa)
Strain SA-120 Contig237, whole genome shotgun sequence {ECO:0000313|EMBL:KIU01545.1}; Flags: Fragment;; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
SCNpilot_expt_1000_bf_scaffold_9545_curated_8
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7304..8164
DNA (861bp) protein (287aa)
Extracellular solute-binding protein family 3 n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JR98_HYPDA
family 3 extracellular solute-binding protein; K02030 polar amino acid transport system substrate-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADJ24083.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_9545_curated_9
unknown

Not on your lists

comp(8209..8562)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B7R2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CPR19799.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
Displaying 9 items

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