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SCNpilot_expt_1000_bf_scaffold_2997_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2997_curated_1
unknown

Not on your lists

387..620
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2997_curated_2
unknown

Not on your lists

650..1090
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2997_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1140..1337)
DNA (198bp) protein (66aa)
UPF0337 protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSW3_9BRAD
UPF0337 protein {ECO:0000313|EMBL:EKS41458.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
CsbD family protein
SCNpilot_expt_1000_bf_scaffold_2997_curated_4
unknown

Not on your lists

1570..1980
DNA (411bp) protein (137aa)
Photosystem reaction center subunit H n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFN1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CPR20192.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
PRC-barrel domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2997_curated_5
unknown

Not on your lists

2055..2252
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2997_curated_6
unknown

Not on your lists

comp(2242..2376)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2997_curated_7
unknown

Not on your lists

2489..3031
DNA (543bp) protein (181aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2997_curated_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3821..5002)
DNA (1182bp) protein (394aa)
Acyl-CoA dehydrogenase n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DUU7_PSEFL
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KIZ44024.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
(R)-benzylsuccinyl-CoA dehydrogenase BbsG
SCNpilot_expt_1000_bf_scaffold_2997_curated_9
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5075..6286)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QT35_RALPI
Uncharacterized protein {ECO:0000313|EMBL:AGW93303.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2997_curated_10
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6377..6820
DNA (444bp) protein (148aa)
Universal stress protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EMI5_METSB
UspA domain-containing protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_expt_1000_bf_scaffold_2997_curated_11
Serratia sp. M24T3, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6945..7127
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Serratia sp. M24T3 RepID=I0QX89_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EIC85912.1}; TaxID=932213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia sp. M24T3.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2997_curated_12
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7394..7972
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00035C1533
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ47709.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2997_curated_13
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7983..9128
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G9R5_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL77502.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_expt_1000_bf_scaffold_2997_curated_14
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9125..9478
DNA (354bp) protein (118aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I411_9BRAD
DNA-binding protein {ECO:0000313|EMBL:ETR78839.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2997_curated_15
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9460..11553
DNA (2094bp) protein (698aa)
CoA-binding n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q134F3_RHOPS
CoA-binding protein {ECO:0000313|EMBL:KJB92463.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
CoA-binding protein
SCNpilot_expt_1000_bf_scaffold_2997_curated_16
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12044..13024
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036B2854
Uncharacterized protein {ECO:0000313|EMBL:AHB48154.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2997_curated_17
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

comp(13683..14546)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZEK3_9CAUL
hypothetical protein
Tax=RBG_13_OP3X_46_9_curated
SCNpilot_expt_1000_bf_scaffold_2997_curated_18
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14620..15894)
DNA (1275bp) protein (425aa)
Glycosyl transferase family 2 n=2 Tax=Ketogulonicigenium vulgare RepID=E3F3F3_KETVY
Glycosyl transferase group 1
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADO41959.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain Y25).;"
Displaying 18 items

View Taxonomy