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SCNpilot_expt_1000_bf_scaffold_5826_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5826_curated_1
unknown

Not on your lists

comp(3..278)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5826_curated_2
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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510..1646
DNA (1137bp) protein (379aa)
ccrfM; adenine-specific DNA methyltransferase (EC:2.1.1.72); K13581 modification methylase [EC:2.1.1.72]
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J948_HYPSM
SCNpilot_expt_1000_bf_scaffold_5826_curated_3
unknown

Not on your lists

comp(1719..2045)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003659CAF
Uncharacterized protein {ECO:0000313|EMBL:CPR21359.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5826_curated_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2388..3176
DNA (789bp) protein (263aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQE4_HYPDA
SCNpilot_expt_1000_bf_scaffold_5826_curated_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3404..4594
DNA (1191bp) protein (397aa)
nuoD; NADH-quinone oxidoreductase subunit D (EC:1.6.5.3); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
NADH-quinone oxidoreductase subunit D n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J906_HYPSM
SCNpilot_expt_1000_bf_scaffold_5826_curated_6
unknown

Not on your lists

4928..5299
DNA (372bp) protein (124aa)
alpha/beta hydrolase fold protein; K03928 carboxylesterase [EC:3.1.1.1]
Alpha/beta hydrolase fold protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JPN3_HYPDA
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CPR21840.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
Displaying 6 items

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