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SCNpilot_expt_1000_bf_scaffold_9024_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9024_curated_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..672
DNA (672bp) protein (224aa)
TRAP transporter solute receptor, TAXI family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12C08_POLSJ
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR76138.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
TRAP transporter solute receptor TAXI family protein; K07080
SCNpilot_expt_1000_bf_scaffold_9024_curated_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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760..3333
DNA (2574bp) protein (858aa)
UPI0003D01FF1 related cluster n=1 Tax=unknown RepID=UPI0003D01FF1
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:ESZ20147.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
TRAP transporter, 4TM/12TM fusion protein
SCNpilot_expt_1000_bf_scaffold_9024_curated_3
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4073..4252)
DNA (180bp) protein (60aa)
Urease accessory protein UreG n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW14_9RHIZ
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
ureG; urease accessory UreG protein; K03189 urease accessory protein
SCNpilot_expt_1000_bf_scaffold_9024_curated_4
unknown

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5668..6177
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9024_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6074..7789)
DNA (1716bp) protein (572aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ureC; urease subunit alpha (EC:3.5.1.5); K01428 urease subunit alpha [EC:3.5.1.5]
Urease subunit alpha n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T6T3_9BRAD
SCNpilot_expt_1000_bf_scaffold_9024_curated_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7840..8142)
DNA (303bp) protein (101aa)
ureB; urease subunit beta (EC:3.5.1.5); K01429 urease subunit beta [EC:3.5.1.5]
urease subunit beta n=1 Tax=Martelella mediterranea RepID=UPI000365A41C
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Displaying 6 items

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