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SCNpilot_expt_1000_bf_scaffold_2448_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2448_curated_1
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..284
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JC31_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB67653.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_2448_curated_2
unknown

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comp(221..916)
DNA (696bp) protein (232aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2448_curated_3
unknown

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1379..1726
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2448_curated_4
unknown

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1811..2329
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2448_curated_5
unknown

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2437..3066
DNA (630bp) protein (210aa)
Thioredoxin SoxW protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CBM8_METED
Putative thioredoxin-like protein (Modular protein) {ECO:0000313|EMBL:CPR15793.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
soxW; thioredoxin SoxW protein
SCNpilot_expt_1000_bf_scaffold_2448_curated_6
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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3108..3491
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJK3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP66801.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
SCNpilot_expt_1000_bf_scaffold_2448_curated_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3669..4607
DNA (939bp) protein (313aa)
Ribosomal L11 methyltransferase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4S2_9RHIZ
ribosomal L11 methyltransferase
Ribosomal L11 methyltransferase {ECO:0000313|EMBL:AGK57227.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_2448_curated_8
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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4710..5357
DNA (648bp) protein (216aa)
msrA2; peptide methionine sulfoxide reductase MsrA; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BRQ7_9GAMM
Tax=RBG_16_Gamma2_60_9_curated
SCNpilot_expt_1000_bf_scaffold_2448_curated_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5381..6220)
DNA (840bp) protein (280aa)
GntR family transcriptional regulator n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6BTE1_PSEST
GntR family transcriptional regulator {ECO:0000313|EMBL:AHL77482.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2448_curated_10
unknown

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comp(6364..7692)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037F50B7
AAA ATPase {ECO:0000313|EMBL:CPR16643.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
ATPase AAA
SCNpilot_expt_1000_bf_scaffold_2448_curated_11
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7851..8579)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JE31_HYPSM
hypothetical protein; K06953
Uncharacterized protein {ECO:0000313|EMBL:CCB64046.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_2448_curated_12
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8576..10177)
DNA (1602bp) protein (534aa)
Helicase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAB8_9RHIZ
Helicase {ECO:0000313|EMBL:AHB47165.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
DEAD/H associated domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2448_curated_13
unknown

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10324..11271
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00037A07ED
SCNpilot_expt_1000_bf_scaffold_2448_curated_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11216..11635)
DNA (420bp) protein (140aa)
Glutathione transport system permease GsiD n=2 Tax=Oligotropha carboxidovorans RepID=B6JJN4_OLICO
gsiD; glutathione transport system permease GsiD; K02034 peptide/nickel transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Displaying 14 items

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