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SCNpilot_expt_1000_bf_scaffold_12385_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12385_curated_1
unknown

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comp(1..210)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12385_curated_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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431..1258
DNA (828bp) protein (276aa)
Glycosyl transferase family protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B079_9RHIZ
glycosyl transferase family protein
Glycosyl transferase family protein {ECO:0000313|EMBL:AGK56308.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_12385_curated_3
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1275..2045
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000361695F
Galactosyltransferase Lgt5 {ECO:0000313|EMBL:KHO15326.1}; TaxID=470 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumannii.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_12385_curated_4
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2103..3065)
DNA (963bp) protein (321aa)
Homocysteine S-methyltransferase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BYS5_NITHN
homocysteine S-methyltransferase
Homocysteine S-methyltransferase {ECO:0000313|EMBL:ADE16063.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
SCNpilot_expt_1000_bf_scaffold_12385_curated_5
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3296..3922
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8X7_STAND
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADH88682.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_expt_1000_bf_scaffold_12385_curated_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3975..4619
DNA (645bp) protein (215aa)
anthranilate synthase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036D5A73
anthranilate synthase, component II, glutamine amidotransferase
Anthranilate synthase, component II, glutamine amidotransferase {ECO:0000313|EMBL:AGK57960.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_12385_curated_7
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4696..5628
DNA (933bp) protein (311aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18]
Anthranilate phosphoribosyltransferase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFN5_9RHIZ
SCNpilot_expt_1000_bf_scaffold_12385_curated_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5634..6617)
DNA (984bp) protein (328aa)
Pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:AHB49421.1}; EC=1.2.1.88 {ECO:0000313|EMBL:AHB49421.1};; EC=1.5.99.8 {ECO:0000313|EMBL:AHB49421.1};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Delta-1-pyrroline-5-carboxylate dehydrogenase; K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000361C5B6
Displaying 8 items

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