ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8216_curated

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8216_curated_1
unknown

Not on your lists

comp(3..116)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8216_curated_2
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

769..1458
DNA (690bp) protein (230aa)
Putative Ser protein kinase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W5B8_MAGSA
putative Ser protein kinase; K07180 serine protein kinase
Putative Ser protein kinase {ECO:0000313|EMBL:BAE50957.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SCNpilot_expt_1000_bf_scaffold_8216_curated_3
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1563..2840
DNA (1278bp) protein (426aa)
UPF0229 protein H261_22683 n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A578_9PROT
UPF0229 protein N826_05560 {ECO:0000256|HAMAP-Rule:MF_01232}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein; K09786 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8216_curated_4
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2729..4105)
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Burkholderia thailandensis RepID=UPI00016A7683
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA50205.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1710b).;"
SCNpilot_expt_1000_bf_scaffold_8216_curated_5
unknown

Not on your lists

4322..4423
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8216_curated_6
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4458..5138
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J9C5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGJ02506.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily
SCNpilot_expt_1000_bf_scaffold_8216_curated_7
unknown

Not on your lists

comp(5233..5475)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8216_curated_8
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5429..5989)
DNA (561bp) protein (187aa)
SAM-dependent methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
UPI0003CECE84 related cluster n=1 Tax=unknown RepID=UPI0003CECE84
Uncharacterized protein {ECO:0000313|EMBL:ESY63767.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCNpilot_expt_1000_bf_scaffold_8216_curated_9
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6165..6860
DNA (696bp) protein (232aa)
cytochrome C oxidase cbb3-type subunit I (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
cytochrome C oxidase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035EEDD0
Cytochrome C oxidase {ECO:0000313|EMBL:AHB48331.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_8216_curated_10
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6948..7676
DNA (729bp) protein (243aa)
peptidase S41 n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000364EF63
cytochrome C oxidase cbb3-type subunit II; K00405 cytochrome c oxidase cbb3-type subunit II
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:ADJ23850.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_8216_curated_11
unknown

Not on your lists

7852..8049
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8216_curated_12
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8046..8915
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037A20AB
cytochrome c oxidase, cbb3-type subunit III; K00406 cytochrome c oxidase cbb3-type subunit III
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_8216_curated_13
unknown

Not on your lists

8940..9155
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8216_curated_14
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10131..10604
DNA (474bp) protein (158aa)
Cytochrome c oxidase cbb3 type accessory protein FixG n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTB4_PARL1
Type cbb3 cytochrome oxidase biogenesis protein CcoG {ECO:0000313|EMBL:BAQ16765.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
cytochrome c oxidase cbb3 type accessory protein FixG
Displaying 14 items

View Taxonomy