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SCNpilot_expt_1000_bf_scaffold_7159_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7159_curated_1
unknown

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comp(2..145)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7159_curated_2
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(224..1192)
DNA (969bp) protein (323aa)
Threonine dehydratase {ECO:0000313|EMBL:EPX80734.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EPX80734.1};; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="Litoreibacter arenae DSM 19593.;"
hypothetical protein; K01754 threonine dehydratase [EC:4.3.1.19]
Threonine dehydratase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9S3I3_9RHOB
SCNpilot_expt_1000_bf_scaffold_7159_curated_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1950..2585
DNA (636bp) protein (212aa)
Major facilitator superfamily protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RGS4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:CDM23449.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7159_curated_4
unknown

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2821..3582
DNA (762bp) protein (254aa)
Nuclease (SNase domain protein) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7E2_HYPSM
Nuclease (SNase domain protein) {ECO:0000313|EMBL:CPR18107.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
nuclease
SCNpilot_expt_1000_bf_scaffold_7159_curated_5
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3866..4135
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000381CBD0
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
SCNpilot_expt_1000_bf_scaffold_7159_curated_6
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4240..6507
DNA (2268bp) protein (756aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000313|EMBL:CCB67967.1};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
pnp; polynucleotide phosphorylase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Polyribonucleotide nucleotidyltransferase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFK6_HYPSM
Displaying 6 items

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