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SCNpilot_expt_1000_bf_scaffold_3582_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3582_curated_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..316)
DNA (315bp) protein (105aa)
DNA repair protein RecO n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JR52_HYPDA
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_3582_curated_2
unknown

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569..799
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3582_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(793..1575)
DNA (783bp) protein (261aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:KFC73924.1}; EC=1.3.1.12 {ECO:0000313|EMBL:KFC73924.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
prephenate dehydrogenase; K00210 prephenate dehydrogenase [EC:1.3.1.12]
Prephenate dehydrogenase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LBC2_9RHIZ
SCNpilot_expt_1000_bf_scaffold_3582_curated_4
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1788..3041)
DNA (1254bp) protein (418aa)
FAD dependent oxidoreductase (EC:1.-.-.-)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003750DCD
FAD dependent oxidoreductase {ECO:0000313|EMBL:EPY02766.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
SCNpilot_expt_1000_bf_scaffold_3582_curated_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3089..3604)
DNA (516bp) protein (172aa)
DNA-binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003652017
ferritin; K04047 starvation-inducible DNA-binding protein
Ferritin Dps family protein {ECO:0000313|EMBL:ACI57600.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_expt_1000_bf_scaffold_3582_curated_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3839..4966
DNA (1128bp) protein (376aa)
UPI0003CFB0ED related cluster n=1 Tax=unknown RepID=UPI0003CFB0ED
Uncharacterized protein {ECO:0000313|EMBL:KDP76277.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3582_curated_7
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5015..5890
DNA (876bp) protein (292aa)
Lytic transglycosylase catalytic n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IJW9_METNO
Soluble lytic murein transglycosylase and related regulatory proteins {ECO:0000313|EMBL:BAQ18374.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
lytic transglycosylase
SCNpilot_expt_1000_bf_scaffold_3582_curated_8
unknown

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7426..7569
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 8 items

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