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SCNpilot_expt_1000_bf_scaffold_6752_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6752_curated_1
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..257)
DNA (255bp) protein (85aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SD36_GEOOG
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADB76385.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_expt_1000_bf_scaffold_6752_curated_2

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comp(612..824)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium FLS18 RepID=C6G402_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACS68537.1}; TaxID=654935 species="Bacteria; environmental samples.;" source="uncultured bacterium FLS18.;"
SCNpilot_expt_1000_bf_scaffold_6752_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1729..2445)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E724B4
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:KFC66766.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6752_curated_4
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3520..3696
DNA (177bp) protein (59aa)
Putative histone protein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1WXZ0_BACMS
putative histone protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_expt_1000_bf_scaffold_6752_curated_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3757..4125
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4R7_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK58494.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_6752_curated_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4242..4901)
DNA (660bp) protein (220aa)
alaS; alanyl-tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Alanine--tRNA ligase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B5V1_9RHIZ
SCNpilot_expt_1000_bf_scaffold_6752_curated_7
unknown

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4979..5215
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6752_curated_8
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5305..6090
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0V7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGY00849.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
Displaying 8 items

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