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SCNpilot_expt_1000_bf_scaffold_4467_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4467_curated_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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44..1483
DNA (1440bp) protein (480aa)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B2S1_9RHIZ
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:AGK56467.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_4467_curated_2
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2437..3618)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCW4_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB67685.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_4467_curated_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4038..4952)
DNA (915bp) protein (305aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8]
CDP-diacylglycerol/serine O-phosphatidyltransferase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQU9_HYPDA
CDP-diacylglycerol/serine O-phosphatidyltransferase {ECO:0000313|EMBL:ADJ22101.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_4467_curated_4
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5022..5318)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RLA1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR26084.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4467_curated_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5471..6535)
DNA (1065bp) protein (355aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JTB4_HYPDA
Fis family two component sigma-54 specific transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADJ24432.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_4467_curated_6
unknown

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6842..7120
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4467_curated_7
unknown

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7273..9075
DNA (1803bp) protein (601aa)
oligoendopeptidase, pepF/M3 family; K08602 oligoendopeptidase F [EC:3.4.24.-]
oligoendopeptidase F n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036FC95F
Oligoendopeptidase, pepF/M3 family {ECO:0000313|EMBL:CPR19824.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_expt_1000_bf_scaffold_4467_curated_8
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9345..10088)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037B3739
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase SpoU {ECO:0000313|EMBL:AGK57226.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Displaying 8 items

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