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SCNpilot_expt_1000_bf_scaffold_4461_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4461_curated_1
unknown

Not on your lists

comp(1..102)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4461_curated_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149..1519)
DNA (1371bp) protein (457aa)
glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329};; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Glucose-6-phosphate isomerase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JT80_HYPDA
SCNpilot_expt_1000_bf_scaffold_4461_curated_3
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1653..3023)
DNA (1371bp) protein (457aa)
pqqG; protease (EC:3.4.24.64)
Putative protease {ECO:0000313|EMBL:CCB67053.1}; EC=3.4.24.64 {ECO:0000313|EMBL:CCB67053.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Putative protease n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J5E4_HYPSM
SCNpilot_expt_1000_bf_scaffold_4461_curated_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3135..4511)
DNA (1377bp) protein (459aa)
Peptidase M16 domain protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JT82_HYPDA
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ADJ24400.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_4461_curated_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4984..6633)
DNA (1650bp) protein (550aa)
ABC transporter related protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUM4_HYPDA
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3
ABC transporter related protein {ECO:0000313|EMBL:ADJ24654.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_4461_curated_6
unknown

Not on your lists

comp(6935..7201)
DNA (267bp) protein (89aa)
Heme exporter protein B n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BBG6_9RHIZ
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
heme exporter protein CcmB
SCNpilot_expt_1000_bf_scaffold_4461_curated_7
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8072..8317
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JDY1_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB67794.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_4461_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8242..8928)
DNA (687bp) protein (229aa)
acyl-CoA dehydrogenase domain-containing protein; K00253 isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
Acyl-CoA dehydrogenase-like protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NWA6_9RHOB
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_4461_curated_9
unknown

Not on your lists

9217..9693
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4461_curated_10
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9690..10277
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DAJ5_BRAJP
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
Displaying 10 items

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