ggKbase home page

SCNpilot_expt_1000_bf_scaffold_7923_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7923_curated_1
unknown

Not on your lists

comp(3..122)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7923_curated_2
unknown

Not on your lists

837..941
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7923_curated_3
unknown

Not on your lists

1095..1718
DNA (624bp) protein (208aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7923_curated_4
unknown

Not on your lists

1839..1946
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7923_curated_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2089..3120)
DNA (1032bp) protein (344aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JW78_9PROT
Oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein {ECO:0000313|EMBL:EKE78832.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_7923_curated_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3117..4133)
DNA (1017bp) protein (339aa)
Dipeptide ABC transporter, ATP-binding component n=1 Tax=Oceanibaculum indicum P24 RepID=K2J6X5_9PROT
Dipeptide ABC transporter, ATP-binding component {ECO:0000313|EMBL:EKE78831.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
peptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_7923_curated_7
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4182..5084)
DNA (903bp) protein (301aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NQ69_9RHIZ
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EKF41495.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
SCNpilot_expt_1000_bf_scaffold_7923_curated_8
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5086..6003)
DNA (918bp) protein (306aa)
AppB n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0Q8R4_DESAH
appB; protein AppB; K02033 peptide/nickel transport system permease protein
AppB {ECO:0000313|EMBL:ACN14404.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
SCNpilot_expt_1000_bf_scaffold_7923_curated_9
unknown

Not on your lists

comp(6138..6242)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7923_curated_10
unknown

Not on your lists

6790..7035
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7923_curated_11
unknown

Not on your lists

comp(7863..8114)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7923_curated_12
unknown

Not on your lists

comp(8271..8546)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7923_curated_13
unknown

Not on your lists

8755..8910
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7923_curated_14
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9508..10737)
DNA (1230bp) protein (410aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Burkholderia sp. RPE64 RepID=R4WY53_9BURK
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:BAN26275.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;"
SCNpilot_expt_1000_bf_scaffold_7923_curated_15
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10775..11650)
DNA (876bp) protein (292aa)
Citrate lyase beta subunit n=1 Tax=Burkholderia sp. RPE64 RepID=R4WP02_9BURK
citrate lyase beta subunit
Citrate lyase beta subunit {ECO:0000313|EMBL:BAN26274.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;"
SCNpilot_expt_1000_bf_scaffold_7923_curated_16
unknown

Not on your lists

11819..12496
DNA (678bp) protein (226aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7923_curated_17
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12383..13675)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000364AF9A
Fmu (Sun) domain-containing protein
Fmu (Sun) domain-containing protein {ECO:0000313|EMBL:AGK57097.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_7923_curated_18
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13677..13985)
DNA (309bp) protein (103aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
guaB; inosine-5`-monophosphate dehydrogenase; K00088 IMP dehydrogenase [EC:1.1.1.205]
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TKK8_9BRAD
SCNpilot_expt_1000_bf_scaffold_7923_curated_19
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14386..15105
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Rothia mucilaginosa (strain DY-18) RepID=D2NRU3_ROTMD
hypothetical protein
Tax=RBG_16_Alphaproteobacteria_64_48_curated
Displaying 19 items

View Taxonomy