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SCNpilot_expt_1000_bf_scaffold_5345_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5345_curated_1
unknown

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comp(2..118)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5345_curated_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1139..2959)
DNA (1821bp) protein (607aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
glucosamine/fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000374280A
SCNpilot_expt_1000_bf_scaffold_5345_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3261..3635)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETH6_BRASB
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_5345_curated_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3664..4554)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BTW7_PUNMI
hypothetical protein; K02051 NitT/TauT family transport system substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCNpilot_expt_1000_bf_scaffold_5345_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4596..5303)
DNA (708bp) protein (236aa)
Glutathione S-transferase {ECO:0000313|EMBL:KFC61619.1}; EC=2.5.1.18 {ECO:0000313|EMBL:KFC61619.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI0003656A58
SCNpilot_expt_1000_bf_scaffold_5345_curated_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5463..6536)
DNA (1074bp) protein (358aa)
peptidase M19 renal dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19]
Peptidase M19 renal dipeptidase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1MA23_METRJ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_expt_1000_bf_scaffold_5345_curated_7
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6605..7888)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000375415A
Uncharacterized protein {ECO:0000313|EMBL:AHB49834.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_5345_curated_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8017..8778)
DNA (762bp) protein (254aa)
Carboxymuconolactone decarboxylase n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0F747_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:ETX02446.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
carboxymuconolactone decarboxylase
SCNpilot_expt_1000_bf_scaffold_5345_curated_9
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8814..9161)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRH3_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ22202.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_5345_curated_10
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9270..10076)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JDC9_HYPSM
hypothetical protein; K06889
Uncharacterized protein {ECO:0000313|EMBL:CCB64009.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_5345_curated_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10090..10905)
DNA (816bp) protein (272aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IWK5_RHOP2
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABD07405.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_expt_1000_bf_scaffold_5345_curated_12
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(11001..11885)
DNA (885bp) protein (295aa)
Ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9E6C1_9BACL
Ubiquinone/menaquinone biosynthesis methyltransferase {ECO:0000313|EMBL:EJY56456.1}; TaxID=1200346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus hesperidum URH17-3-68.;"
SCNpilot_expt_1000_bf_scaffold_5345_curated_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12013..12345)
DNA (333bp) protein (111aa)
Acyl-CoA transferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KI73_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_5345_curated_14
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13239..13802)
DNA (564bp) protein (188aa)
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27]
Anthranilate synthase component I {ECO:0000313|EMBL:ACL60415.1}; EC=4.1.3.27 {ECO:0000313|EMBL:ACL60415.1};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
Anthranilate synthase component I n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IP97_METNO
Displaying 14 items

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