ggKbase home page

SCNpilot_expt_1000_bf_scaffold_7854_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7854_curated_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..445)
DNA (444bp) protein (148aa)
arsC; arsenate reductase (EC:1.20.4.1 3.1.3.48)
Arsenate reductase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SGV6_9RHIZ
Arsenate reductase {ECO:0000313|EMBL:AHB49732.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_7854_curated_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(442..798)
DNA (357bp) protein (119aa)
ArsR family transcriptional regulator n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003626916
ArsR family transcriptional regulator {ECO:0000313|EMBL:AHB49731.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
ArsR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_7854_curated_3
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(841..1692)
DNA (852bp) protein (284aa)
Putative beta-lactamase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G027_9BRAD
putative beta-lactamase
Putative beta-lactamase {ECO:0000313|EMBL:BAL74114.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_expt_1000_bf_scaffold_7854_curated_4
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1749..2279)
DNA (531bp) protein (177aa)
Haloacid dehalogenase-like hydrolase, putative n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WF19_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:AHY52655.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
HAD superfamily hydrolase
SCNpilot_expt_1000_bf_scaffold_7854_curated_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(2690..3058)
DNA (369bp) protein (123aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
SCNpilot_expt_1000_bf_scaffold_7854_curated_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3356..4381)
DNA (1026bp) protein (342aa)
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYR7_HYPDA
SCNpilot_expt_1000_bf_scaffold_7854_curated_7
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4405..5151
DNA (747bp) protein (249aa)
3-oxoacyl-ACP synthase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFY7_9RHIZ
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:AHB48859.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
3-oxoacyl-(acyl-carrier-protein) reductase
SCNpilot_expt_1000_bf_scaffold_7854_curated_8
unknown

Not on your lists

5421..5666
DNA (246bp) protein (82aa)
acyl carrier protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000366C776
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
acyl carrier protein; K02078 acyl carrier protein
SCNpilot_expt_1000_bf_scaffold_7854_curated_9
unknown

Not on your lists

5865..7130
DNA (1266bp) protein (422aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
fabF; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JDK0_HYPSM
SCNpilot_expt_1000_bf_scaffold_7854_curated_10
unknown

Not on your lists

7376..8671
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7H2_HYPSM
Uncharacterized protein {ECO:0000313|EMBL:CPR21647.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein; K07082 UPF0755 protein
SCNpilot_expt_1000_bf_scaffold_7854_curated_11
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8887..9477
DNA (591bp) protein (197aa)
Putative metallo-beta-lactamase family protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5ASA4_METEA
metallo-beta-lactamase family protein
Putative metallo-beta-lactamase family protein {ECO:0000313|EMBL:ACS40345.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
Displaying 11 items

View Taxonomy