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SCNpilot_expt_1000_bf_scaffold_8453_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8453_curated_1
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..178)
DNA (177bp) protein (59aa)
TRAP transporter solute receptor, TAXI family protein n=1 Tax=Thauera sp. 63 RepID=N6XDM1_9RHOO
TRAP transporter solute receptor, TAXI family protein {ECO:0000313|EMBL:ENO77475.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8453_curated_2
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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525..1958
DNA (1434bp) protein (478aa)
cytochrome bd ubiquinol oxidase, subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
Cytochrome bd quinol oxidase subunit 1 apoprotein {ECO:0000313|EMBL:ABG65433.1}; EC=1.10.3.- {ECO:0000313|EMBL:ABG65433.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Cytochrome bd quinol oxidase subunit 1 apoprotein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AZ2_MESSB
SCNpilot_expt_1000_bf_scaffold_8453_curated_3
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1964..2968
DNA (1005bp) protein (335aa)
cytochrome d ubiquinol oxidase, subunit II; K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
Cytochrome bd quinol oxidase subunit 2 apoprotein {ECO:0000313|EMBL:ABG65432.1}; EC=1.10.3.- {ECO:0000313|EMBL:ABG65432.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Cytochrome bd quinol oxidase subunit 2 apoprotein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AZ3_MESSB
SCNpilot_expt_1000_bf_scaffold_8453_curated_4
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2984..4231)
DNA (1248bp) protein (416aa)
cysG; siroheme synthase; K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000378AEE9
Siroheme synthase {ECO:0000313|EMBL:ACM38931.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_expt_1000_bf_scaffold_8453_curated_5
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4366..7032)
DNA (2667bp) protein (889aa)
molybdopterin oxidoreductase; K00372 nitrate reductase catalytic subunit [EC:1.7.99.4]
Molybdopterin oxidoreductase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YJG7_9RHIZ
Molybdopterin oxidoreductase {ECO:0000313|EMBL:EHH05161.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_expt_1000_bf_scaffold_8453_curated_6
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7383..7571)
DNA (189bp) protein (63aa)
nitrite reductase (NAD(P)H) large subunit; K00362 nitrite reductase (NAD(P)H) large subunit [EC:1.7.1.4]
NAD(P)H-dependent nitrite reductase, large subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YRW4_9RHIZ
NAD(P)H-dependent nitrite reductase, large subunit {ECO:0000313|EMBL:EIM26706.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
Displaying 6 items

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